C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein 165
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000141622 RNF165 9606 + 18:46326809-46463140 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000269439 RNF165-001 46334224-46463140 protein_coding
  ENST00000543885 RNF165-201 46334224-46460820 protein_coding
  ENST00000586604 RNF165-002 46334224-46463140 nonsense_mediated_decay
  ENST00000587853 RNF165-006 46333968-46337647 protein_coding
  ENST00000588679 RNF165-008 46334224-46337127 protein_coding
  ENST00000590330 RNF165-007 46334028-46336628 protein_coding
  ENST00000592777 RNF165-004 46447447-46456067 retained_intron
  ENST00000593230 RNF165-003 46326809-46450349 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000269439ENST00000543885ENST00000586604ENST00000587853ENST00000588679ENST00000590330ENST00000592777
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000269439 0.079±0.00 0.185±0.00 N/A 0.826±0.17 0.324±0.00 0.138±0.00 0.170±0.00 0.102±0.00 0.079±0.00 0.229±0.00 N/A 0.097±0.00 0.073±0.00 0.109±0.00
ENST00000543885 N/A N/A N/A 0.461±0.00 0.044±0.00 0.050±0.00 0.083±0.00 N/A 0.056±0.00 N/A 0.139±0.00 N/A N/A N/A
ENST00000586604 N/A N/A 0.027±0.00 1.892±0.00 0.197±0.15 N/A N/A 0.109±0.01 0.172±0.00 0.025±0.00 0.047±0.00 0.046±0.04 0.056±0.04 0.069±0.00
ENST00000587853 N/A N/A N/A N/A N/A N/A 0.079±0.00 0.108±0.00 0.116±0.00 N/A 0.252±0.00 0.066±0.00 0.039±0.00 0.231±0.00
ENST00000588679 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.079±0.00 N/A N/A N/A 0.065±0.00
ENST00000590330 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.332±0.00 N/A N/A N/A N/A
ENST00000592777 N/A N/A 0.531±0.00 N/A N/A N/A N/A 1.142±0.00 1.296±0.00 N/A N/A 0.094±0.00 0.113±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000B1 CIL_0000B1_0002 CGP 18:46326809-46657033

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077906 rnf165a ring finger protein 165a protein_coding Danio_rerio
ENSDARG00000078817 rnf165b ring finger protein 165b protein_coding Danio_rerio
ENSMUSG00000025427 Rnf165 ring finger protein 165 protein_coding Mus_musculus

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