C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: synaptonemal complex central element protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025480 Syce1 10090 - 7:140777229-140787854 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026553 Syce1-201 140777229-140787854 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026553
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026553 0.097±0.05 0.065±0.00 0.039±0.02 0.079±0.00 0.098±0.04 0.117±0.02 0.049±0.02 0.053±0.02 0.074±0.03 0.246±0.08 0.031±0.01 0.273±0.11 1.323±1.02 165.576±25.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00001G CIL_00001G_0002 CGP 7:140763739-140787854

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000795 ISS synaptonemal complex
GO:0000801 IDA central element
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0007130 IC synaptonemal complex assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000171772 SYCE1 synaptonemal complex central element protein 1 protein_coding Homo_sapiens

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