C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: resistance to inhibitors of cholinesterase 8 homolog (C. elegans)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025485 Ric8 10090 + 7:140856957-140863730 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026558 Ric8-001 140856957-140863730 protein_coding
  ENSMUST00000123925 Ric8-002 140857699-140862959 retained_intron
  ENSMUST00000131850 Ric8-003 140860642-140863143 retained_intron
  ENSMUST00000139956 Ric8-006 140857442-140858542 processed_transcript
  ENSMUST00000147815 Ric8-007 140858162-140859734 processed_transcript
  ENSMUST00000151384 Ric8-004 140857315-140858342 retained_intron
  ENSMUST00000152212 Ric8-008 140861173-140862619 retained_intron
  ENSMUST00000153498 Ric8-005 140857422-140858558 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000026558ENSMUST00000123925ENSMUST00000131850ENSMUST00000139956ENSMUST00000153498
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000026558 15.710±0.73 12.300±2.04 9.633±0.11 12.488±3.43 12.382±3.01 17.482±5.44 6.678±0.26 9.496±1.66 9.326±1.13 17.890±1.49 13.337±2.57 8.449±1.14
ENSMUST00000123925 18.837±3.13 N/A 16.924±0.31 20.676±2.32 11.496±0.64 15.508±3.35 9.246±0.00 N/A N/A 15.064±2.05 13.839±1.63 16.348±3.21
ENSMUST00000131850 N/A N/A N/A N/A 7.163±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139956 N/A 32.690±0.51 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153498 N/A 28.682±2.70 N/A N/A 34.142±5.58 33.734±0.79 N/A N/A N/A 31.468±2.70 34.295±3.33 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006LA CIL_0006LA_0002 CGP 7:140856957-140882309

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0001944 IMP vasculature development
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005515 IPI protein binding
GO:0005737 ISS cytoplasm
GO:0005886 ISS plasma membrane
GO:0007193 IDA adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway
GO:0007369 IMP gastrulation
GO:0008542 IMP visual learning
GO:0009416 IMP response to light stimulus
GO:0016020 IDA membrane
GO:0042074 IMP cell migration involved in gastrulation
GO:0043547 IEA positive regulation of GTPase activity
GO:0070586 IMP cell-cell adhesion involved in gastrulation
GO:0071711 IMP basement membrane organization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007247 ric8a resistance to inhibitors of cholinesterase 8 homolog A protein_coding Danio_rerio
ENSG00000177963 RIC8A RIC8 guanine nucleotide exchange factor A protein_coding Homo_sapiens

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