C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: resistance to inhibitors of cholinesterase 8 homolog (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026558 Ric8-001 ENSMUSG00000025485 10090 + 7:140856957-140863730 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000026558
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000026558 15.710±0.73 12.300±2.04 9.633±0.11 12.488±3.43 12.382±3.01 17.482±5.44 6.678±0.26 9.496±1.66 9.326±1.13 17.890±1.49 13.337±2.57 8.449±1.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006LA CIL_0006LA_0002 CGP 7:140856957-140882309

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0001944 IMP vasculature development
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005515 IPI protein binding
GO:0005737 ISS cytoplasm
GO:0005886 ISS plasma membrane
GO:0007193 IDA adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway
GO:0007369 IMP gastrulation
GO:0008542 IMP visual learning
GO:0009416 IMP response to light stimulus
GO:0016020 IDA membrane
GO:0042074 IMP cell migration involved in gastrulation
GO:0043547 IEA positive regulation of GTPase activity
GO:0070586 IMP cell-cell adhesion involved in gastrulation
GO:0071711 IMP basement membrane organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000325207 RIC8A-001 protein_coding Homo_sapiens 0 1622
ENST00000524854 RIC8A-016 protein_coding Homo_sapiens 0 468
ENST00000526104 RIC8A-002 protein_coding Homo_sapiens 0 1700
ENST00000526982 RIC8A-005 nonsense_mediated_decay Homo_sapiens 0 638
ENST00000527039 RIC8A-012 retained_intron Homo_sapiens 0 551
ENST00000527696 RIC8A-003 protein_coding Homo_sapiens 0 1570
ENST00000527728 RIC8A-011 protein_coding Homo_sapiens 0 496
ENST00000530149 RIC8A-004 retained_intron Homo_sapiens 0 209
ENST00000532241 RIC8A-013 retained_intron Homo_sapiens 0 239

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