C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: p53 induced death domain protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025507 Pidd1 10090 - 7:141438113-141444025 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026580 Pidd1-001 141438113-141444025 protein_coding
  ENSMUST00000106005 Pidd1-201 141438515-141443355 protein_coding
  ENSMUST00000128703 Pidd1-004 141438113-141443356 nonsense_mediated_decay
  ENSMUST00000130878 Pidd1-007 141442166-141443994 processed_transcript
  ENSMUST00000131621 Pidd1-008 141439499-141440124 retained_intron
  ENSMUST00000131980 Pidd1-003 141438113-141443992 retained_intron
  ENSMUST00000138065 Pidd1-006 141438125-141443356 retained_intron
  ENSMUST00000147268 Pidd1-005 141438117-141444008 retained_intron
  ENSMUST00000154949 Pidd1-009 141438530-141443320 retained_intron
  ENSMUST00000190068 Pidd1-002 141438113-141443353 nonsense_mediated_decay
  ENSMUST00000190303 Pidd1-012 141441050-141442289 retained_intron
  ENSMUST00000190882 Pidd1-010 141438525-141443320 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026580ENSMUST00000106005ENSMUST00000128703ENSMUST00000131621ENSMUST00000131980ENSMUST00000147268ENSMUST00000154949ENSMUST00000190068ENSMUST00000190303ENSMUST00000190882
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026580 1.313±0.37 N/A 0.873±0.11 1.288±0.39 0.936±0.00 1.152±0.36 0.116±0.00 0.657±0.15 2.253±2.39 0.541±0.10 N/A 1.655±0.58 0.803±0.17 0.695±0.15
ENSMUST00000106005 N/A 0.963±0.37 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128703 N/A N/A N/A N/A N/A N/A N/A N/A 0.269±0.00 N/A 0.159±0.07 N/A 0.839±0.30 N/A
ENSMUST00000131621 N/A N/A N/A 1.036±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.476±0.00 N/A
ENSMUST00000131980 1.102±0.19 0.716±0.08 0.254±0.00 1.768±0.78 1.324±0.56 1.150±0.33 0.220±0.12 0.353±0.12 2.078±2.07 0.493±0.10 0.129±0.00 1.931±1.18 0.573±0.13 0.203±0.07
ENSMUST00000147268 0.893±0.25 N/A 0.552±0.02 1.060±0.34 0.838±0.10 0.798±0.23 0.143±0.04 0.366±0.10 2.473±1.41 0.487±0.05 0.114±0.02 1.393±0.51 0.567±0.03 0.689±0.13
ENSMUST00000154949 N/A 1.022±0.32 N/A N/A 1.196±0.05 1.132±0.11 N/A 0.207±0.00 0.223±0.04 N/A N/A 1.464±0.14 N/A 0.398±0.00
ENSMUST00000190068 N/A N/A N/A N/A 0.398±0.00 N/A N/A N/A N/A N/A 0.087±0.00 0.583±0.11 N/A N/A
ENSMUST00000190303 N/A 2.116±0.13 N/A N/A N/A N/A N/A N/A 1.041±0.00 N/A 0.152±0.02 4.675±1.22 N/A N/A
ENSMUST00000190882 N/A 1.027±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005X0 CIL_0005X0_0002 CGP 7:141429739-141444025
CIL_0003EP CIL_0003EP_0002 CGP 7:141438113-141451585

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0006919 IGI activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0006977 IEA DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0043066 IEA negative regulation of apoptotic process
GO:1902043 IGI positive regulation of extrinsic apoptotic signaling pathway via death domain receptors
GO:2001235 IGI positive regulation of apoptotic signaling pathway
GO:2001238 IGI positive regulation of extrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074626 pidd p53-induced death domain protein protein_coding Danio_rerio
ENSG00000177595 PIDD1 p53-induced death domain protein 1 protein_coding Homo_sapiens

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