C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: p53 induced death domain protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000026580 Pidd1-001 ENSMUSG00000025507 10090 - 7:141438113-141444025 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000026580
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000026580 1.313±0.37 0.873±0.11 1.288±0.39 0.936±0.00 1.152±0.36 0.116±0.00 0.657±0.15 2.253±2.39 0.541±0.10 1.655±0.58 0.803±0.17 0.695±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005X0 CIL_0005X0_0002 CGP 7:141429739-141444025
CIL_0003EP CIL_0003EP_0002 CGP 7:141438113-141451585

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0006919 IGI activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0006977 IEA DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0043066 IEA negative regulation of apoptotic process
GO:1902043 IGI positive regulation of extrinsic apoptotic signaling pathway via death domain receptors
GO:2001235 IGI positive regulation of apoptotic signaling pathway
GO:2001238 IGI positive regulation of extrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000347755 PIDD1-001 protein_coding Homo_sapiens 0 2281
ENST00000411829 PIDD1-002 protein_coding Homo_sapiens 0 1786
ENST00000524486 PIDD1-011 nonsense_mediated_decay Homo_sapiens 0 1823
ENST00000525028 PIDD1-003 nonsense_mediated_decay Homo_sapiens 0 1212
ENST00000527357 PIDD1-010 retained_intron Homo_sapiens 0 438
ENST00000527812 PIDD1-013 processed_transcript Homo_sapiens 0 272
ENST00000531286 PIDD1-005 nonsense_mediated_decay Homo_sapiens 0 1088
ENST00000534525 PIDD1-006 retained_intron Homo_sapiens 0 950

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