C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane 9 superfamily member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025544 Tm9sf2 10090 + 14:122107038-122159604 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026624 Tm9sf2-001 122107038-122159604 protein_coding
  ENSMUST00000170007 Tm9sf2-003 122107138-122137478 nonsense_mediated_decay
  ENSMUST00000171318 Tm9sf2-002 122107268-122158716 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026624ENSMUST00000170007ENSMUST00000171318
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026624 13.690±5.80 41.131±22.46 40.018±10.11 17.563±7.19 15.961±8.70 73.040±22.16 7.835±2.33 25.668±5.00 24.794±7.81 31.867±9.39 14.584±5.06 37.039±15.10 45.231±22.65 25.703±14.82
ENSMUST00000170007 38.721±7.03 312.315±60.41 N/A 125.784±0.00 136.712±4.11 364.295±64.69 N/A 75.624±0.00 30.927±8.88 82.674±35.35 N/A 244.221±54.47 306.909±21.06 121.273±0.00
ENSMUST00000171318 13.610±0.34 N/A N/A 8.495±1.91 28.988±8.73 N/A 18.935±4.51 33.220±9.58 37.589±12.43 23.134±3.86 6.068±0.00 30.534±20.73 24.012±0.00 47.719±27.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093F CIL_00093F_0002 VISTA 14:121953729-122558284
CIL_0000O8 CIL_0000O8_0002 CGP 14:122107038-122402232

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005768 IEA endosome
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003866 tm9sf2 transmembrane 9 superfamily member 2 protein_coding Danio_rerio
ENSG00000125304 TM9SF2 transmembrane 9 superfamily member 2 protein_coding Homo_sapiens

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