C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000O8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000125304-ENSG00000125246 CGP 9606 13:99501417-99897134
GeneTranscriptPositionBiotype
ENSG00000125246 (CLYBL)
citrate lyase beta like 		ENST00000339105 (CLYBL-003) 99606696-99892564 protein_coding
ENST00000376354 (CLYBL-002) 99606690-99891613 protein_coding
ENST00000376355 (CLYBL-001) 99606669-99897134 protein_coding
ENST00000416504 (CLYBL-004) 99858861-99865238 protein_coding
ENST00000419700 (CLYBL-007) 99866317-99892894 protein_coding
ENST00000425186 (CLYBL-006) 99871018-99891612 protein_coding
ENST00000443887 (CLYBL-005) 99858861-99865238 protein_coding
ENSG00000125304 (TM9SF2)
transmembrane 9 superfamily member 2 		ENST00000376387 (TM9SF2-001) 99501417-99564006 protein_coding
ENST00000463709 (TM9SF2-003) 99514215-99537862 processed_transcript
ENST00000466555 (TM9SF2-004) 99540511-99541736 processed_transcript
ENSG00000201245 (SNORA25)
Small nucleolar RNA SNORA25 		ENST00000364375 (SNORA25.1-207) 99783857-99783983 snoRNA
ENSG00000227659 (CLYBL-AS2)
CLYBL antisense RNA 2 		ENST00000430125 (CLYBL-AS2-001) 99690081-99690971 antisense
ENSG00000234168 (LINC01039)
long intergenic non-protein coding RNA 1039 		ENST00000437113 (LINC01039-001) 99577112-99580368 lincRNA
ENSG00000234239 (CFL1P8)
cofilin 1 (non-muscle) pseudogene 8 		ENST00000436148 (CFL1P8-001) 99582706-99583180 processed_pseudogene
ENSG00000234303 (CLYBL-AS1)
CLYBL antisense RNA 1 		ENST00000416009 (CLYBL-AS1-001) 99726247-99727491 antisense

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0000O8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025544-ENSMUSG00000025545 CGP 10090 14:122107038-122402232
GeneTranscriptPositionBiotype
ENSMUSG00000025544 (Tm9sf2)
transmembrane 9 superfamily member 2 		ENSMUST00000026624 (Tm9sf2-001) 122107038-122159604 protein_coding
ENSMUST00000170007 (Tm9sf2-003) 122107138-122137478 nonsense_mediated_decay
ENSMUST00000171318 (Tm9sf2-002) 122107268-122158716 protein_coding
ENSMUSG00000025545 (Clybl)
citrate lyase beta like 		ENSMUST00000026625 (Clybl-201) 122181694-122402232 protein_coding
ENSMUSG00000066538 (Gm6254)
predicted gene 6254 		ENSMUST00000168178 (Gm6254-001) 122117938-122119009 processed_pseudogene
ENSMUSG00000090674 (Gm17082)
predicted gene 17082 		ENSMUST00000166043 (Gm17082-001) 122121553-122122643 processed_pseudogene
ENSMUSG00000095311 (Gm25464)
predicted gene, 25464 		ENSMUST00000175481 (Gm25464-201) 122388054-122388160 snRNA
ENSMUSG00000100585 (RP23-18J12.5)
RIKEN cDNA 1700108J01 gene 		ENSMUST00000187423 (RP23-18J12.5-001) 122229905-122233654 antisense

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000O8_0001ENSG00000125246ENST00000339105ENST00000376354ENST00000376355ENST00000416504ENST00000419700ENST00000425186ENST00000443887ENSG00000125304ENST00000376387ENST00000463709ENST00000466555ENSG00000201245ENST00000364375ENSG00000227659ENST00000430125ENSG00000234168ENST00000437113ENSG00000234239ENST00000436148ENSG00000234303ENST00000416009CIL_0000O8_0002ENSMUSG00000025544ENSMUST00000026624ENSMUST00000170007ENSMUST00000171318ENSMUSG00000025545ENSMUST00000026625ENSMUSG00000066538ENSMUST00000168178ENSMUSG00000090674ENSMUST00000166043ENSMUSG00000095311ENSMUST00000175481ENSMUSG00000100585ENSMUST00000187423
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000O8_0001ENSG00000125246ENST00000339105ENST00000376354ENST00000376355ENST00000416504ENST00000443887ENSG00000125304ENST00000376387ENSG00000201245ENST00000364375ENSG00000227659ENST00000430125ENSG00000234168ENST00000437113ENSG00000234239ENST00000436148ENSG00000234303ENST00000416009CIL_0000O8_0002ENSMUSG00000025544ENSMUST00000026624ENSMUST00000170007ENSMUST00000171318ENSMUSG00000025545ENSMUST00000026625ENSMUSG00000066538ENSMUST00000168178ENSMUSG00000090674ENSMUST00000166043ENSMUSG00000095311ENSMUST00000175481ENSMUSG00000100585ENSMUST00000187423
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000125246 ENST00000339105 1.590±0.00 2.394±0.00 1.063±0.00 1.496±0.86 2.050±0.00 1.142±0.37 2.788±2.44 4.619±1.24 1.925±1.68 1.659±0.00 3.676±0.05 2.807±0.23 1.150±0.69 2.888±0.12
ENST00000376354 0.720±0.00 0.773±0.00 N/A 1.735±0.00 N/A N/A 1.007±0.84 2.800±0.51 1.065±0.00 0.744±0.00 1.383±0.00 0.858±0.00 1.022±0.00 2.084±0.00
ENST00000376355 N/A 0.143±0.00 0.250±0.00 0.230±0.07 0.184±0.00 0.270±0.10 0.182±0.12 0.483±0.15 0.119±0.08 0.074±0.00 0.214±0.03 0.183±0.10 N/A 0.336±0.12
ENST00000416504 N/A N/A 1.945±0.00 N/A N/A 0.627±0.00 N/A N/A N/A N/A N/A N/A 0.574±0.00 N/A
ENST00000419700 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000425186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443887 N/A N/A N/A N/A 1.315±0.00 N/A N/A N/A N/A N/A N/A N/A 0.633±0.00 1.439±0.00
ENSG00000125304 ENST00000376387 7.928±0.00 26.390±0.00 12.222±0.00 11.366±7.17 15.462±10.04 28.687±0.22 14.450±5.40 18.237±13.01 6.034±1.61 20.458±2.92 2.673±0.50 34.756±24.31 44.324±21.65 25.989±19.50
ENST00000463709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000201245 ENST00000364375 N/A 0.130±0.00 N/A 0.618±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000227659 ENST00000430125 N/A 0.032±0.00 1.131±0.00 N/A 0.065±0.00 0.708±0.00 N/A 1.051±1.00 0.274±0.23 0.967±0.00 N/A 0.060±0.00 N/A N/A
ENSG00000234168 ENST00000437113 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.067±0.04
ENSG00000234239 ENST00000436148 N/A N/A N/A N/A N/A N/A 0.322±0.00 N/A N/A N/A N/A N/A N/A 0.050±0.00
ENSG00000234303 ENST00000416009 N/A N/A N/A 0.103±0.00 N/A N/A N/A 0.099±0.00 N/A 0.146±0.00 N/A 0.372±0.33 N/A 1.913±0.21
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025544 ENSMUST00000026624 13.690±5.80 41.131±22.46 40.018±10.11 17.563±7.19 15.961±8.70 73.040±22.16 7.835±2.33 25.668±5.00 24.794±7.81 31.867±9.39 14.584±5.06 37.039±15.10 45.231±22.65 25.703±14.82
ENSMUST00000170007 38.721±7.03 312.315±60.41 N/A 125.784±0.00 136.712±4.11 364.295±64.69 N/A 75.624±0.00 30.927±8.88 82.674±35.35 N/A 244.221±54.47 306.909±21.06 121.273±0.00
ENSMUST00000171318 13.610±0.34 N/A N/A 8.495±1.91 28.988±8.73 N/A 18.935±4.51 33.220±9.58 37.589±12.43 23.134±3.86 6.068±0.00 30.534±20.73 24.012±0.00 47.719±27.30
ENSMUSG00000025545 ENSMUST00000026625 40.023±18.65 7.839±1.71 23.227±0.47 4.533±0.70 25.136±7.81 13.127±3.02 39.053±2.98 51.485±2.73 17.282±2.01 4.679±0.53 22.900±1.69 9.800±4.58 10.755±3.60 1.574±0.28
ENSMUSG00000066538 ENSMUST00000168178 0.096±0.02 0.222±0.00 0.814±0.59 0.728±0.55 0.171±0.10 0.321±0.00 0.049±0.00 0.088±0.03 0.694±1.17 0.143±0.00 0.040±0.01 0.191±0.13 0.268±0.22 0.207±0.10
ENSMUSG00000090674 ENSMUST00000166043 0.074±0.02 N/A 0.498±0.26 0.352±0.20 N/A N/A 0.064±0.02 0.090±0.05 0.400±0.41 0.307±0.23 0.032±0.01 0.260±0.23 0.318±0.24 0.704±1.14
ENSMUSG00000095311 ENSMUST00000175481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.960±0.00 79.829±63.85 N/A N/A
ENSMUSG00000100585 ENSMUST00000187423 N/A N/A 0.037±0.00 0.111±0.00 N/A 0.474±0.09 N/A 0.108±0.01 0.149±0.00 N/A N/A N/A N/A 73.779±13.34

Loading