C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: thymidine kinase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025574 Tk1 10090 - 11:117815526-117826092 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026661 Tk1-001 117815526-117826092 protein_coding
  ENSMUST00000129852 Tk1-002 117822458-117825847 retained_intron
  ENSMUST00000141939 Tk1-007 117815624-117816654 retained_intron
  ENSMUST00000150027 Tk1-005 117824834-117825817 retained_intron
  ENSMUST00000153298 Tk1-003 117821718-117825867 retained_intron
  ENSMUST00000153872 Tk1-004 117815905-117817424 retained_intron
  ENSMUST00000154790 Tk1-006 117821640-117825837 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainLiverOvaryPlacentaTestisENSMUST00000026661ENSMUST00000129852
Transcript ID Adipose Brain Liver Ovary Placenta Testis
ENSMUST00000026661 17.398±0.43 19.937±10.38 88.296±52.51 13.115±4.18 49.399±6.48 1.000±0.00
ENSMUST00000129852 N/A 0.295±0.00 N/A 1.891±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007YS CIL_0007YS_0002 VISTA 11:117565410-118167678
CIL_0003U7 CIL_0003U7_0003 CGP 11:117815526-117839908

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001889 IEA liver development
GO:0004797 IDA thymidine kinase activity
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0008270 ISS zinc ion binding
GO:0009157 IEA deoxyribonucleoside monophosphate biosynthetic process
GO:0009165 IEA nucleotide biosynthetic process
GO:0009636 IEA response to toxic substance
GO:0014856 IEA skeletal muscle cell proliferation
GO:0016310 IEA phosphorylation
GO:0019206 IEA nucleoside kinase activity
GO:0031667 IEA response to nutrient levels
GO:0042802 IEA identical protein binding
GO:0046104 IEA thymidine metabolic process
GO:0046688 IEA response to copper ion
GO:0048565 IEA digestive tract development
GO:0051289 IEA protein homotetramerization
GO:0051414 IEA response to cortisol
GO:0060138 IEA fetal process involved in parturition
GO:0071897 IEA DNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086561 tk1 thymidine kinase 1, soluble protein_coding Danio_rerio
ENSG00000167900 TK1 thymidine kinase 1, soluble protein_coding Homo_sapiens

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