C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: neuromedin B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025723 Nmb 10090 - 7:80902227-80905076 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026817 Nmb-001 80902228-80905076 protein_coding
  ENSMUST00000119428 Nmb-003 80902234-80905060 protein_coding
  ENSMUST00000146619 Nmb-002 80902227-80904393 retained_intron
  ENSMUST00000149792 Nmb-004 80902234-80904374 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastMuscleOvaryTestisENSMUST00000026817ENSMUST00000119428
Transcript ID Adrenal Breast Muscle Ovary Testis
ENSMUST00000026817 3.299±0.00 3.213±0.00 4.655±0.67 5.674±0.77 4.860±0.00
ENSMUST00000119428 2.685±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008FE CIL_0008FE_0002 VISTA 7:80488938-81090184
CIL_0000N2 CIL_0000N2_0002 CGP 7:80890723-80905076
CIL_0003XQ CIL_0003XQ_0003 CGP 7:80902227-80947780

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005576 IEA extracellular region
GO:0007204 IEA positive regulation of cytosolic calcium ion concentration
GO:0007218 IEA neuropeptide signaling pathway
GO:0008284 IEA positive regulation of cell proliferation
GO:0031710 IEA neuromedin B receptor binding
GO:0042593 IEA glucose homeostasis
GO:0043005 IEA neuron projection
GO:0046887 IEA positive regulation of hormone secretion
GO:0046888 IEA negative regulation of hormone secretion
GO:0050482 IEA arachidonic acid secretion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068144 nmba neuromedin Ba protein_coding Danio_rerio
ENSDARG00000077167 nmbb neuromedin Bb protein_coding Danio_rerio
ENSG00000197696 NMB neuromedin B protein_coding Homo_sapiens

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