C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000N2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000177082-ENSG00000197696 CGP 9606 15:84639281-84658563
GeneTranscriptPositionBiotype
ENSG00000176700 (SCAND2P)
SCAN domain containing 2 pseudogene 		ENST00000348993 (SCAND2P-001) 84631451-84647478 processed_transcript
ENST00000427525 (SCAND2P-002) 84631479-84635421 processed_transcript
ENST00000530891 (SCAND2P-004) 84631827-84637421 processed_transcript
ENST00000541103 (SCAND2P-011) 84631963-84642066 transcribed_unprocessed_pseudogene
ENST00000558508 (SCAND2P-010) 84634281-84639562 processed_transcript
ENST00000558612 (SCAND2P-008) 84631543-84634039 processed_transcript
ENST00000560416 (SCAND2P-005) 84631827-84638413 processed_transcript
ENST00000560543 (SCAND2P-009) 84634262-84639640 processed_transcript
ENST00000560678 (SCAND2P-006) 84634230-84640559 processed_transcript
ENSG00000177082 (WDR73)
WD repeat domain 73 		ENST00000398528 (WDR73-002) 84642768-84654343 processed_transcript
ENST00000434634 (WDR73-001) 84639281-84654335 protein_coding
ENST00000558019 (WDR73-011) 84648312-84654283 retained_intron
ENST00000558487 (WDR73-017) 84648520-84654000 retained_intron
ENST00000558521 (WDR73-013) 84645469-84654273 nonsense_mediated_decay
ENST00000558608 (WDR73-008) 84643145-84648586 retained_intron
ENST00000559015 (WDR73-003) 84643055-84654280 retained_intron
ENST00000559126 (WDR73-005) 84643082-84654246 retained_intron
ENST00000559178 (WDR73-021) 84645988-84654258 nonsense_mediated_decay
ENST00000559224 (WDR73-020) 84645469-84654266 nonsense_mediated_decay
ENST00000559452 (WDR73-014) 84645578-84654272 retained_intron
ENST00000559877 (WDR73-018) 84648465-84654000 retained_intron
ENST00000559994 (WDR73-007) 84642768-84654280 retained_intron
ENST00000560088 (WDR73-019) 84646185-84653750 retained_intron
ENST00000560182 (WDR73-015) 84648457-84654241 retained_intron
ENST00000560252 (WDR73-009) 84647086-84654298 retained_intron
ENST00000560835 (WDR73-012) 84646037-84654283 processed_transcript
ENST00000560966 (WDR73-006) 84644955-84654231 retained_intron
ENST00000561329 (WDR73-004) 84645694-84654274 retained_intron
ENST00000561434 (WDR73-010) 84653182-84654290 retained_intron
ENST00000561447 (WDR73-016) 84646306-84654231 processed_transcript
ENSG00000197696 (NMB)
neuromedin B 		ENST00000360476 (NMB-001) 84655129-84658548 protein_coding
ENST00000394588 (NMB-002) 84655129-84658563 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0000N2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025722-ENSMUSG00000025723 CGP 10090 7:80890723-80905076
GeneTranscriptPositionBiotype
ENSMUSG00000025722 (Wdr73)
WD repeat domain 73 		ENSMUST00000026816 (Wdr73-001) 80890723-80901269 protein_coding
ENSMUST00000131651 (Wdr73-008) 80893061-80900719 processed_transcript
ENSMUST00000133979 (Wdr73-007) 80892996-80901219 processed_transcript
ENSMUST00000135905 (Wdr73-004) 80891261-80901234 retained_intron
ENSMUST00000139990 (Wdr73-002) 80890724-80901232 retained_intron
ENSMUST00000145923 (Wdr73-006) 80900673-80901232 processed_transcript
ENSMUST00000146402 (Wdr73-010) 80893060-80901220 protein_coding
ENSMUST00000147154 (Wdr73-005) 80897936-80901244 processed_transcript
ENSMUST00000147589 (Wdr73-009) 80893700-80900504 processed_transcript
ENSMUST00000152518 (Wdr73-003) 80890724-80901232 retained_intron
ENSMUSG00000025723 (Nmb)
neuromedin B 		ENSMUST00000026817 (Nmb-001) 80902228-80905076 protein_coding
ENSMUST00000119428 (Nmb-003) 80902234-80905060 protein_coding
ENSMUST00000146619 (Nmb-002) 80902227-80904393 retained_intron
ENSMUST00000149792 (Nmb-004) 80902234-80904374 retained_intron
ENSMUSG00000025724 (Sec11a)
SEC11 homolog A (S. cerevisiae) 		ENSMUST00000026818 (Sec11a-001) 80915377-80947780 protein_coding
ENSMUST00000117383 (Sec11a-003) 80915661-80947780 protein_coding
ENSMUST00000119980 (Sec11a-006) 80916089-80947780 protein_coding
ENSMUST00000120285 (Sec11a-010) 80907716-80947513 protein_coding
ENSMUST00000130981 (Sec11a-005) 80915377-80923558 retained_intron
ENSMUST00000136556 (Sec11a-002) 80920895-80947742 retained_intron
ENSMUST00000147813 (Sec11a-009) 80904889-80947545 processed_transcript
ENSMUST00000147881 (Sec11a-008) 80915763-80947511 processed_transcript
ENSMUST00000150049 (Sec11a-004) 80915377-80925650 processed_transcript
ENSMUST00000153053 (Sec11a-007) 80915566-80916330 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000N2_0001ENSG00000176700ENST00000348993ENST00000427525ENST00000530891ENST00000541103ENST00000558508ENST00000558612ENST00000560416ENST00000560543ENST00000560678ENSG00000177082ENST00000398528ENST00000434634ENST00000558019ENST00000558487ENST00000558521ENST00000558608ENST00000559015ENST00000559126ENST00000559178ENST00000559224ENST00000559452ENST00000559877ENST00000559994ENST00000560088ENST00000560182ENST00000560252ENST00000560835ENST00000560966ENST00000561329ENST00000561434ENST00000561447ENSG00000197696ENST00000360476ENST00000394588CIL_0000N2_0002ENSMUSG00000025722ENSMUST00000026816ENSMUST00000131651ENSMUST00000133979ENSMUST00000135905ENSMUST00000139990ENSMUST00000145923ENSMUST00000146402ENSMUST00000147154ENSMUST00000147589ENSMUST00000152518ENSMUSG00000025723ENSMUST00000026817ENSMUST00000119428ENSMUST00000146619ENSMUST00000149792ENSMUSG00000025724ENSMUST00000026818ENSMUST00000117383ENSMUST00000119980ENSMUST00000120285ENSMUST00000130981ENSMUST00000136556ENSMUST00000147813ENSMUST00000147881ENSMUST00000150049ENSMUST00000153053
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000N2_0001ENSG00000176700ENST00000348993ENST00000427525ENSG00000177082ENST00000398528ENST00000434634ENST00000558608ENST00000559015ENST00000559126ENST00000559994ENST00000560966ENSG00000197696ENST00000360476ENST00000394588CIL_0000N2_0002ENSMUSG00000025722ENSMUST00000026816ENSMUST00000131651ENSMUST00000133979ENSMUST00000135905ENSMUST00000139990ENSMUST00000152518ENSMUSG00000025723ENSMUST00000026817ENSMUST00000119428ENSMUSG00000025724ENSMUST00000026818ENSMUST00000117383ENSMUST00000119980ENSMUST00000147881ENSMUST00000150049ENSMUST00000153053
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000176700 ENST00000348993 N/A N/A N/A 0.367±0.00 0.630±0.00 0.228±0.00 N/A N/A 0.224±0.00 0.473±0.00 N/A 0.511±0.00 N/A 0.657±0.00
ENST00000427525 N/A N/A N/A N/A N/A N/A N/A 1.225±0.00 N/A N/A 0.365±0.00 1.393±0.00 N/A N/A
ENST00000530891 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541103 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558612 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560416 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560678 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000177082 ENST00000398528 N/A N/A N/A 1.423±0.00 N/A 1.124±0.00 1.959±0.00 N/A 1.549±0.00 N/A 1.201±0.00 5.781±0.00 2.985±1.30 3.230±0.00
ENST00000434634 1.448±0.00 2.286±0.00 N/A 1.544±0.00 1.284±0.00 0.473±0.00 0.683±0.00 3.165±0.00 0.470±0.00 1.323±0.33 0.627±0.00 1.760±0.83 1.312±0.36 0.942±0.05
ENST00000558019 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558521 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558608 N/A 4.206±0.00 3.217±0.00 1.229±0.00 N/A N/A 1.349±0.00 5.045±0.00 N/A N/A 0.675±0.00 2.944±0.78 1.567±0.00 5.159±0.00
ENST00000559015 N/A N/A N/A N/A N/A N/A N/A N/A 1.390±0.00 N/A N/A N/A N/A N/A
ENST00000559126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.909±0.00 N/A N/A
ENST00000559178 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559224 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559452 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559994 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.777±0.00 N/A N/A N/A N/A
ENST00000560088 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560252 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560966 0.832±0.00 1.390±0.00 N/A 0.785±0.01 N/A 0.422±0.00 N/A 0.363±0.00 0.547±0.00 0.799±0.00 N/A 1.049±0.00 N/A 1.836±0.00
ENST00000561329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000197696 ENST00000360476 6.447±0.00 2.293±0.00 0.241±0.00 1.369±0.00 55.349±0.00 0.390±0.11 1.457±1.27 3.870±3.52 0.770±0.00 0.659±0.24 N/A 3.155±2.10 1.258±0.58 2.683±1.89
ENST00000394588 3.648±0.00 N/A N/A 2.188±1.76 17.306±0.00 1.560±0.00 0.325±0.00 N/A N/A 4.761±0.00 1.421±0.00 1.553±0.93 0.680±0.17 1.983±1.24
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025722 ENSMUST00000026816 4.113±1.44 N/A 4.070±0.33 6.321±3.66 4.048±0.73 N/A 1.785±0.38 3.544±1.80 4.015±2.93 4.239±1.14 1.211±0.15 5.761±0.94 5.031±3.52 4.217±1.31
ENSMUST00000131651 N/A N/A N/A 3.885±0.00 N/A N/A N/A N/A 3.042±0.00 N/A N/A 7.686±0.00 7.581±0.96 N/A
ENSMUST00000133979 N/A 9.414±2.82 N/A N/A 2.831±0.00 4.835±0.04 N/A 3.320±0.00 3.324±0.52 3.486±0.41 N/A 8.294±2.25 N/A N/A
ENSMUST00000135905 2.082±0.67 1.223±0.31 2.007±0.14 3.488±1.38 1.742±0.45 1.100±0.26 0.546±0.05 1.135±0.23 1.377±0.70 1.558±0.37 0.311±0.10 1.930±0.68 1.622±0.46 1.408±0.40
ENSMUST00000139990 N/A 0.883±0.00 N/A N/A N/A N/A N/A N/A 0.632±0.00 N/A 0.292±0.00 N/A 0.831±0.00 N/A
ENSMUST00000145923 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147154 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152518 N/A N/A N/A 2.622±0.00 N/A N/A N/A N/A N/A N/A N/A 2.546±0.00 0.925±0.04 N/A
ENSMUSG00000025723 ENSMUST00000026817 N/A 3.299±0.00 N/A N/A 3.213±0.00 N/A N/A N/A N/A N/A 4.655±0.67 5.674±0.77 N/A 4.860±0.00
ENSMUST00000119428 N/A 2.685±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000025724 ENSMUST00000026818 12.746±2.20 N/A 49.873±6.16 28.582±1.28 6.544±2.03 5.705±2.20 8.400±1.90 16.555±5.05 24.458±15.81 9.443±2.64 10.196±1.24 5.719±1.61 49.196±39.65 9.826±0.50
ENSMUST00000117383 8.919±2.44 7.742±2.71 N/A N/A 10.661±3.89 8.236±1.66 4.247±0.33 5.448±1.02 10.152±2.22 11.827±2.42 N/A 16.281±6.61 N/A 8.689±2.97
ENSMUST00000119980 N/A 14.709±3.23 N/A 13.958±0.00 6.420±1.39 10.097±3.31 N/A 6.839±0.01 7.649±2.05 N/A N/A 24.168±29.91 125.372±40.23 19.886±0.00
ENSMUST00000120285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136556 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147813 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147881 N/A N/A N/A 9.363±0.00 10.755±0.00 N/A N/A N/A N/A N/A N/A 63.478±3.90 61.814±9.60 N/A
ENSMUST00000150049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 39.596±1.34 31.309±5.79 N/A
ENSMUST00000153053 24.465±4.25 18.309±4.20 N/A 28.839±14.23 29.408±4.46 26.758±8.08 18.259±1.51 42.540±5.99 26.976±6.03 31.484±2.79 N/A 59.815±14.11 95.483±0.00 25.750±3.57

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