C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, DHHC domain containing 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025786 Zdhhc3 10090 - 9:123066160-123113205 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026892 Zdhhc3-008 123076832-123113180 nonsense_mediated_decay
  ENSMUST00000123937 Zdhhc3-011 123089033-123113178 nonsense_mediated_decay
  ENSMUST00000129151 Zdhhc3-002 123082848-123113204 retained_intron
  ENSMUST00000129862 Zdhhc3-010 123078300-123100349 nonsense_mediated_decay
  ENSMUST00000130717 Zdhhc3-007 123100320-123112832 protein_coding
  ENSMUST00000138622 Zdhhc3-004 123078040-123113178 nonsense_mediated_decay
  ENSMUST00000140497 Zdhhc3-001 123066160-123113147 nonsense_mediated_decay
  ENSMUST00000147563 Zdhhc3-003 123074146-123113205 protein_coding
  ENSMUST00000150679 Zdhhc3-006 123084296-123113124 nonsense_mediated_decay
  ENSMUST00000152396 Zdhhc3-009 123080358-123113121 nonsense_mediated_decay
  ENSMUST00000155778 Zdhhc3-005 123077500-123113166 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026892ENSMUST00000123937ENSMUST00000129151ENSMUST00000140497ENSMUST00000147563ENSMUST00000155778
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026892 11.259±3.02 11.965±2.31 14.312±0.16 10.904±0.83 12.941±1.97 16.578±3.81 4.952±1.02 9.781±0.94 6.312±2.21 37.749±5.24 8.930±0.38 12.498±3.43 7.886±2.54 2.359±1.02
ENSMUST00000123937 39.187±19.03 116.978±23.62 N/A N/A 91.194±20.13 95.535±38.83 17.921±3.27 42.187±14.32 14.496±2.50 131.706±65.67 N/A 111.880±10.87 N/A 6.807±0.85
ENSMUST00000129151 N/A 13.014±0.00 N/A N/A 14.813±0.00 N/A N/A N/A N/A N/A N/A 16.639±5.49 N/A N/A
ENSMUST00000140497 5.941±2.01 9.664±1.34 6.356±0.02 1.949±0.15 7.369±1.15 6.495±1.30 4.011±1.45 4.974±0.43 2.619±0.44 13.537±2.29 3.882±1.76 7.871±2.09 4.605±2.19 0.735±0.28
ENSMUST00000147563 3.408±0.59 N/A 3.790±0.21 3.457±0.16 4.024±0.00 4.639±0.11 N/A 2.363±0.00 1.822±0.57 8.076±0.26 4.946±0.46 2.728±0.61 2.221±0.29 0.899±0.34
ENSMUST00000155778 N/A N/A N/A 6.144±0.83 N/A N/A N/A N/A N/A N/A N/A 4.199±0.00 7.306±0.80 0.638±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000741 CIL_000741_0002 CGP 9:123021326-123067561
CIL_000130 CIL_000130_0002 CGP 9:123034739-123113205
CIL_00073X CIL_00073X_0002 CGP 9:123066160-123136129

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005794 IDA Golgi apparatus
GO:0006605 IDA protein targeting
GO:0008270 IEA zinc ion binding
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016409 IDA palmitoyltransferase activity
GO:0018345 IDA protein palmitoylation
GO:0019706 IEA protein-cysteine S-palmitoyltransferase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058830 zdhhc3b zinc finger, DHHC-type containing 3b protein_coding Danio_rerio
ENSG00000163812 ZDHHC3 zinc finger, DHHC-type containing 3 protein_coding Homo_sapiens

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