C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000741_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000169964-ENSG00000163810 CGP 9606 3:44861869-44914990
GeneTranscriptPositionBiotype
ENSG00000163808 (KIF15)
kinesin family member 15 		ENST00000326047 (KIF15-001) 44761717-44853261 protein_coding
ENST00000422209 (KIF15-006) 44843123-44873376 nonsense_mediated_decay
ENST00000425755 (KIF15-004) 44799187-44853021 protein_coding
ENST00000438321 (KIF15-002) 44761721-44853261 nonsense_mediated_decay
ENST00000453693 (KIF15-005) 44814971-44853254 nonsense_mediated_decay
ENST00000481166 (KIF15-007) 44761862-44827490 protein_coding
ENST00000493134 (KIF15-003) 44799213-44813270 retained_intron
ENSG00000163810 (TGM4)
transglutaminase 4 		ENST00000296125 (TGM4-001) 44874611-44914990 protein_coding
ENST00000422219 (TGM4-003) 44874635-44901570 nonsense_mediated_decay
ENST00000459830 (TGM4-008) 44903535-44907202 retained_intron
ENST00000471637 (TGM4-009) 44874623-44876490 processed_transcript
ENST00000490928 (TGM4-004) 44874608-44889170 retained_intron
ENST00000495844 (TGM4-007) 44890339-44896739 retained_intron
ENSG00000169964 (TMEM42)
transmembrane protein 42 		ENST00000302392 (TMEM42-001) 44861869-44865670 protein_coding
ENST00000477126 (TMEM42-002) 44861904-44865670 retained_intron
ENSG00000235845 (RP11-272D20.2)
 ENST00000427258 (RP11-272D20.2-001) 44899178-44900925 antisense
CIL_000741_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000066233-ENSMUSG00000025787 CGP 10090 9:123021326-123067561
GeneTranscriptPositionBiotype
ENSMUSG00000025786 (Zdhhc3)
zinc finger, DHHC domain containing 3 		ENSMUST00000026892 (Zdhhc3-008) 123076832-123113180 nonsense_mediated_decay
ENSMUST00000123937 (Zdhhc3-011) 123089033-123113178 nonsense_mediated_decay
ENSMUST00000129151 (Zdhhc3-002) 123082848-123113204 retained_intron
ENSMUST00000129862 (Zdhhc3-010) 123078300-123100349 nonsense_mediated_decay
ENSMUST00000130717 (Zdhhc3-007) 123100320-123112832 protein_coding
ENSMUST00000138622 (Zdhhc3-004) 123078040-123113178 nonsense_mediated_decay
ENSMUST00000140497 (Zdhhc3-001) 123066160-123113147 nonsense_mediated_decay
ENSMUST00000147563 (Zdhhc3-003) 123074146-123113205 protein_coding
ENSMUST00000150679 (Zdhhc3-006) 123084296-123113124 nonsense_mediated_decay
ENSMUST00000152396 (Zdhhc3-009) 123080358-123113121 nonsense_mediated_decay
ENSMUST00000155778 (Zdhhc3-005) 123077500-123113166 nonsense_mediated_decay
ENSMUSG00000066233 (Tmem42)
transmembrane protein 42 		ENSMUST00000084733 (Tmem42-201) 123021326-123023490 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000741_0001ENSG00000163808ENST00000326047ENST00000422209ENST00000425755ENST00000438321ENST00000453693ENST00000481166ENST00000493134ENSG00000163810ENST00000296125ENST00000422219ENST00000459830ENST00000471637ENST00000490928ENST00000495844ENSG00000169964ENST00000302392ENST00000477126ENSG00000235845ENST00000427258CIL_000741_0002ENSMUSG00000025786ENSMUST00000026892ENSMUST00000123937ENSMUST00000129151ENSMUST00000129862ENSMUST00000130717ENSMUST00000138622ENSMUST00000140497ENSMUST00000147563ENSMUST00000150679ENSMUST00000152396ENSMUST00000155778ENSMUSG00000066233ENSMUST00000084733
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000741_0001ENSG00000163808ENST00000326047ENST00000422209ENST00000425755ENST00000438321ENST00000453693ENST00000481166ENST00000493134ENSG00000163810ENST00000296125ENST00000459830ENSG00000169964ENST00000302392ENST00000477126ENSG00000235845ENST00000427258CIL_000741_0002ENSMUSG00000025786ENSMUST00000026892ENSMUST00000123937ENSMUST00000129151ENSMUST00000140497ENSMUST00000147563ENSMUST00000155778ENSMUSG00000066233ENSMUST00000084733
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163808 ENST00000326047 N/A N/A 0.013±0.00 N/A N/A 1.404±0.00 N/A N/A N/A N/A N/A 0.566±0.01 0.300±0.00 N/A
ENST00000422209 N/A 0.183±0.00 N/A 0.102±0.00 0.158±0.00 N/A 0.173±0.00 0.087±0.00 0.044±0.00 0.114±0.00 N/A 1.873±0.00 N/A 6.302±0.00
ENST00000425755 0.025±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.080±0.00 N/A N/A N/A 4.024±0.19
ENST00000438321 N/A N/A N/A 0.027±0.00 0.026±0.00 N/A 0.028±0.01 0.014±0.01 N/A N/A N/A 0.092±0.00 N/A N/A
ENST00000453693 N/A 0.109±0.00 N/A N/A N/A 0.040±0.00 0.057±0.00 0.007±0.00 0.017±0.00 0.143±0.00 N/A 1.273±0.00 1.155±0.00 5.146±3.83
ENST00000481166 0.113±0.00 N/A N/A 0.195±0.00 N/A N/A 0.012±0.00 N/A 0.155±0.00 N/A 0.033±0.00 N/A N/A N/A
ENST00000493134 N/A N/A N/A 0.115±0.00 N/A N/A N/A N/A N/A N/A 0.159±0.00 N/A N/A N/A
ENSG00000163810 ENST00000296125 N/A N/A 0.129±0.00 0.023±0.00 0.005±0.00 N/A N/A 0.027±0.00 0.126±0.00 0.009±0.00 0.176±0.00 0.016±0.01 0.028±0.00 N/A
ENST00000422219 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000459830 N/A N/A 0.123±0.00 N/A 0.097±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471637 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490928 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000169964 ENST00000302392 6.217±0.00 5.064±0.00 0.083±0.00 5.628±4.30 5.474±4.41 3.050±2.14 2.127±1.76 6.029±3.90 1.693±0.81 6.726±0.00 3.365±1.63 8.346±3.16 6.258±0.65 13.183±1.10
ENST00000477126 0.360±0.00 0.446±0.00 0.092±0.00 0.572±0.16 0.382±0.02 0.586±0.30 0.144±0.06 0.355±0.23 0.208±0.12 0.296±0.00 0.251±0.12 0.730±0.12 0.282±0.08 1.411±0.78
ENSG00000235845 ENST00000427258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.154±0.00 N/A N/A 0.173±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025786 ENSMUST00000026892 11.259±3.02 11.965±2.31 14.312±0.16 10.904±0.83 12.941±1.97 16.578±3.81 4.952±1.02 9.781±0.94 6.312±2.21 37.749±5.24 8.930±0.38 12.498±3.43 7.886±2.54 2.359±1.02
ENSMUST00000123937 39.187±19.03 116.978±23.62 N/A N/A 91.194±20.13 95.535±38.83 17.921±3.27 42.187±14.32 14.496±2.50 131.706±65.67 N/A 111.880±10.87 N/A 6.807±0.85
ENSMUST00000129151 N/A 13.014±0.00 N/A N/A 14.813±0.00 N/A N/A N/A N/A N/A N/A 16.639±5.49 N/A N/A
ENSMUST00000129862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130717 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138622 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140497 5.941±2.01 9.664±1.34 6.356±0.02 1.949±0.15 7.369±1.15 6.495±1.30 4.011±1.45 4.974±0.43 2.619±0.44 13.537±2.29 3.882±1.76 7.871±2.09 4.605±2.19 0.735±0.28
ENSMUST00000147563 3.408±0.59 N/A 3.790±0.21 3.457±0.16 4.024±0.00 4.639±0.11 N/A 2.363±0.00 1.822±0.57 8.076±0.26 4.946±0.46 2.728±0.61 2.221±0.29 0.899±0.34
ENSMUST00000150679 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155778 N/A N/A N/A 6.144±0.83 N/A N/A N/A N/A N/A N/A N/A 4.199±0.00 7.306±0.80 0.638±0.00
ENSMUSG00000066233 ENSMUST00000084733 9.345±0.48 60.985±29.43 9.259±1.25 5.693±2.38 9.081±3.83 9.518±2.65 7.337±2.02 11.701±1.01 7.456±3.92 13.548±6.35 7.757±0.67 17.874±10.13 4.411±2.45 3.386±1.25

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