C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lysophospholipase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025903 Lypla1 10090 + 1:4807788-4886770 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027036 Lypla1-001 4807823-4846739 protein_coding
  ENSMUST00000115529 Lypla1-008 4807911-4845352 protein_coding
  ENSMUST00000119612 Lypla1-009 4807896-4845174 protein_coding
  ENSMUST00000131119 Lypla1-006 4808237-4841093 protein_coding
  ENSMUST00000134384 Lypla1-002 4807788-4848410 nonsense_mediated_decay
  ENSMUST00000137887 Lypla1-007 4807898-4840969 protein_coding
  ENSMUST00000141278 Lypla1-004 4836905-4842827 retained_intron
  ENSMUST00000150971 Lypla1-003 4807918-4841286 protein_coding
  ENSMUST00000155020 Lypla1-005 4807892-4886770 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027036ENSMUST00000115529ENSMUST00000119612ENSMUST00000134384ENSMUST00000155020
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027036 13.560±0.87 27.412±11.10 18.658±0.44 6.274±0.16 13.943±4.83 20.894±3.45 12.996±2.10 36.981±6.97 26.885±15.25 13.339±0.86 25.081±1.04 8.239±4.26 17.378±9.39 6.900±0.47
ENSMUST00000115529 N/A N/A N/A N/A 11.133±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 15.903±1.69
ENSMUST00000119612 N/A 86.787±8.07 N/A N/A N/A 36.749±9.35 18.348±0.00 46.860±3.50 129.831±5.47 16.754±0.80 N/A 16.794±4.83 N/A N/A
ENSMUST00000134384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.712±0.35 N/A 26.450±5.97
ENSMUST00000155020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.044±4.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TN CIL_0008TN_0002 VISTA 1:4721600-5324300
CIL_00053V CIL_00053V_0002 CGP 1:4773206-4886770

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002084 IMP protein depalmitoylation
GO:0005739 IDA mitochondrion
GO:0005829 IDA cytosol
GO:0006631 IEA fatty acid metabolic process
GO:0008474 ISS palmitoyl-(protein) hydrolase activity
GO:0016787 IEA hydrolase activity
GO:0042997 IMP negative regulation of Golgi to plasma membrane protein transport
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041337 lypla1 lysophospholipase I protein_coding Danio_rerio
ENSG00000120992 LYPLA1 lysophospholipase I protein_coding Homo_sapiens

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