C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysophospholipase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027036 Lypla1-001 ENSMUSG00000025903 10090 + 1:4807823-4846739 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027036
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027036 13.560±0.87 27.412±11.10 18.658±0.44 6.274±0.16 13.943±4.83 20.894±3.45 12.996±2.10 36.981±6.97 26.885±15.25 13.339±0.86 25.081±1.04 8.239±4.26 17.378±9.39 6.900±0.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TN CIL_0008TN_0002 VISTA 1:4721600-5324300
CIL_00053V CIL_00053V_0002 CGP 1:4773206-4886770

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002084 IMP protein depalmitoylation
GO:0005739 IDA mitochondrion
GO:0005829 IDA cytosol
GO:0006631 IEA fatty acid metabolic process
GO:0008474 ISS palmitoyl-(protein) hydrolase activity
GO:0042997 IMP negative regulation of Golgi to plasma membrane protein transport
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000316963 LYPLA1-001 protein_coding Homo_sapiens 0 1138
ENST00000343231 LYPLA1-015 protein_coding Homo_sapiens 0 896
ENST00000402650 LYPLA1P3-001 processed_pseudogene Homo_sapiens 0 778
ENST00000434514 LYPLA1P1-001 processed_pseudogene Homo_sapiens 0 442
ENST00000513113 LYPLA1P2-001 processed_pseudogene Homo_sapiens 0 741
ENST00000517297 LYPLA1-008 retained_intron Homo_sapiens 0 243
ENST00000518546 LYPLA1-007 protein_coding Homo_sapiens 0 520
ENST00000519272 LYPLA1-014 processed_transcript Homo_sapiens 0 427
ENST00000519891 LYPLA1-005 processed_transcript Homo_sapiens 0 313
ENST00000519926 LYPLA1-006 processed_transcript Homo_sapiens 0 440
ENST00000520718 LYPLA1-010 processed_transcript Homo_sapiens 0 507
ENST00000520896 LYPLA1-002 processed_transcript Homo_sapiens 0 254
ENST00000521352 LYPLA1-013 protein_coding Homo_sapiens 0 497
ENST00000521898 LYPLA1-011 protein_coding Homo_sapiens 0 255
ENST00000618741 LYPLA1-201 protein_coding Homo_sapiens 0 1057
ENST00000618914 LYPLA1-202 protein_coding Homo_sapiens 0 575

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