C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysophospholipase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000155020 Lypla1-005 ENSMUSG00000025903 10090 + 1:4807892-4886770 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000155020
Transcript ID Testis
ENSMUST00000155020 23.044±4.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TN CIL_0008TN_0002 VISTA 1:4721600-5324300
CIL_00053V CIL_00053V_0002 CGP 1:4773206-4886770

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002084 IMP protein depalmitoylation
GO:0005739 IDA mitochondrion
GO:0005829 IDA cytosol
GO:0042997 IMP negative regulation of Golgi to plasma membrane protein transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000316963 LYPLA1-001 protein_coding Homo_sapiens 0 643
ENST00000343231 LYPLA1-015 protein_coding Homo_sapiens 0 520
ENST00000396401 TCEA1-013 protein_coding Homo_sapiens 2e-38 165
ENST00000402650 LYPLA1P3-001 processed_pseudogene Homo_sapiens 0 606
ENST00000420496 TCEA1P2-001 processed_pseudogene Homo_sapiens 0 243
ENST00000434514 LYPLA1P1-001 processed_pseudogene Homo_sapiens 0 401
ENST00000513113 LYPLA1P2-001 processed_pseudogene Homo_sapiens 0 558
ENST00000517297 LYPLA1-008 retained_intron Homo_sapiens 1e-26 124
ENST00000517351 TCEA1-004 processed_transcript Homo_sapiens 0 244
ENST00000518310 TCEA1-009 nonsense_mediated_decay Homo_sapiens 1e-39 167
ENST00000518546 LYPLA1-007 protein_coding Homo_sapiens 0 520
ENST00000518784 TCEA1-010 protein_coding Homo_sapiens 0 209
ENST00000519272 LYPLA1-014 processed_transcript Homo_sapiens 0 255
ENST00000519891 LYPLA1-005 processed_transcript Homo_sapiens 0 313
ENST00000519926 LYPLA1-006 processed_transcript Homo_sapiens 0 322
ENST00000520534 TCEA1-011 protein_coding Homo_sapiens 0 243
ENST00000520718 LYPLA1-010 processed_transcript Homo_sapiens 0 331
ENST00000520896 LYPLA1-002 processed_transcript Homo_sapiens 0 254
ENST00000521086 TCEA1-001 processed_transcript Homo_sapiens 7e-39 167
ENST00000521352 LYPLA1-013 protein_coding Homo_sapiens 0 460
ENST00000521604 TCEA1-002 protein_coding Homo_sapiens 0 243
ENST00000521836 TCEA1-005 processed_transcript Homo_sapiens 0 244
ENST00000521898 LYPLA1-011 protein_coding Homo_sapiens 0 255
ENST00000522397 TCEA1-006 processed_transcript Homo_sapiens 0 241
ENST00000618741 LYPLA1-201 protein_coding Homo_sapiens 0 643
ENST00000618914 LYPLA1-202 protein_coding Homo_sapiens 0 324

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