C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: excision repair cross-complementing rodent repair deficiency, complementation group 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026048 Ercc5 10090 + 1:44147744-44181260 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027214 Ercc5-001 44147847-44181260 protein_coding
  ENSMUST00000131177 Ercc5-002 44147847-44181260 retained_intron
  ENSMUST00000137380 Ercc5-003 44156935-44166998 retained_intron
  ENSMUST00000139510 Ercc5-005 44147909-44161844 processed_transcript
  ENSMUST00000145406 Ercc5-006 44147932-44158255 processed_transcript
  ENSMUST00000155862 Ercc5-004 44158830-44167217 retained_intron
  ENSMUST00000188376 Ercc5-007 44147744-44149522 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027214ENSMUST00000131177ENSMUST00000145406ENSMUST00000188376
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027214 2.944±0.66 1.700±0.60 6.481±1.84 4.703±1.18 2.153±0.52 2.419±0.70 1.739±0.14 2.219±0.25 2.141±0.93 2.422±0.46 2.572±0.33 3.695±1.96 4.002±2.60 2.732±2.69
ENSMUST00000131177 N/A 0.636±0.00 1.207±0.26 1.551±0.28 N/A 0.994±0.73 N/A N/A 0.389±0.07 0.927±0.31 0.446±0.08 1.592±0.00 0.399±0.00 0.306±0.00
ENSMUST00000145406 N/A 3.478±0.94 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188376 N/A 0.754±0.05 N/A N/A N/A 0.722±0.00 N/A N/A N/A 1.413±0.00 N/A 0.974±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000WF CIL_0000WF_0002 CGP 1:44118957-44181260

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003697 IEA single-stranded DNA binding
GO:0004519 IEA endonuclease activity
GO:0005634 IEA nucleus
GO:0006281 IMP DNA repair
GO:0006289 IMP nucleotide-excision repair
GO:0008340 IMP determination of adult lifespan
GO:0009411 IMP response to UV
GO:0009650 IMP UV protection
GO:0035264 IMP multicellular organism growth
GO:0090305 IEA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000023678 ercc5 excision repair cross-complementing rodent repair deficiency, complementation group 5 (xeroderma pigmentosum, complementation gr protein_coding Danio_rerio
ENSG00000134899 ERCC5 excision repair cross-complementation group 5 protein_coding Homo_sapiens
ENSG00000270181 BIVM-ERCC5 BIVM-ERCC5 readthrough protein_coding Homo_sapiens

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