C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATP-binding cassette, sub-family B (MDR/TAP), member 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026198 Abcb6 10090 - 1:75171717-75180392 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027396 Abcb6-001 75171717-75180392 protein_coding
  ENSMUST00000159219 Abcb6-004 75172720-75180286 retained_intron
  ENSMUST00000160081 Abcb6-003 75171719-75180286 retained_intron
  ENSMUST00000160757 Abcb6-005 75175552-75178949 retained_intron
  ENSMUST00000161103 Abcb6-002 75177910-75180376 retained_intron
  ENSMUST00000161215 Abcb6-006 75171758-75172869 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027396
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027396 27.654±4.88 22.985±1.06 22.465±11.64 18.272±3.40 36.438±2.34 13.195±1.20 31.954±3.32 46.479±13.42 18.234±3.49 10.617±0.48 22.917±5.49 11.535±1.59 11.190±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000916 CIL_000916_0002 VISTA 1:75047166-75647630
CIL_0006EB CIL_0006EB_0002 CGP 1:75168646-75180392
CIL_0006EA CIL_0006EA_0002 CGP 1:75171717-75192196

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0005740 IEA mitochondrial envelope
GO:0005741 IEA mitochondrial outer membrane
GO:0005768 IDA endosome
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0006200 IEA ATP catabolic process
GO:0006779 IEA porphyrin-containing compound biosynthetic process
GO:0007420 IEA brain development
GO:0015439 IEA heme-transporting ATPase activity
GO:0015562 IEA efflux transmembrane transporter activity
GO:0015886 IEA heme transport
GO:0016021 IBA integral component of membrane
GO:0020037 IEA heme binding
GO:0031307 IEA integral component of mitochondrial outer membrane
GO:0042626 IBA ATPase activity, coupled to transmembrane movement of substances
GO:0043588 IEA skin development
GO:0055085 IBA transmembrane transport
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063297 abcb6a ATP-binding cassette, sub-family B (MDR/TAP), member 6a protein_coding Danio_rerio
ENSDARG00000074254 abcb6b ATP-binding cassette, sub-family B (MDR/TAP), member 6b protein_coding Danio_rerio
ENSG00000115657 ABCB6 ATP-binding cassette, sub-family B (MDR/TAP), member 6 (Langereis blood group) protein_coding Homo_sapiens

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