C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0006EA_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000115657-ENSG00000198925 | CGP | 9606 | 2:219209768-219229717  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000115657  (ABCB6)ATP-binding cassette, sub-family B (MDR/TAP), member 6 (Langereis blood group) |
ENST00000265316 (ABCB6-001)
|
219209768-219218990 | protein_coding | |
|
ENST00000295750 (ABCB6-005)
|
219209772-219218354 | protein_coding | ||
|
ENST00000417678 (ABCB6-003)
|
219214168-219218426 | nonsense_mediated_decay | ||
|
ENST00000443805 (ABCB6-012)
|
219209776-219211038 | nonsense_mediated_decay | ||
|
ENST00000448398 (ABCB6-015)
|
219213240-219218476 | nonsense_mediated_decay | ||
|
ENST00000452545 (ABCB6-007)
|
219215029-219218190 | nonsense_mediated_decay | ||
|
ENST00000485773 (ABCB6-013)
|
219209772-219211108 | retained_intron | ||
|
ENST00000487380 (ABCB6-014)
|
219209772-219211039 | retained_intron | ||
|
ENST00000492543 (ABCB6-011)
|
219210711-219213420 | retained_intron | ||
|
ENST00000492953 (ABCB6-008)
|
219214141-219216288 | retained_intron | ||
|
ENST00000494639 (ABCB6-010)
|
219213602-219214683 | retained_intron | ||
|
ENST00000496984 (ABCB6-009)
|
219213898-219215437 | retained_intron | ||
|
ENST00000497882 (ABCB6-006)
|
219209772-219215885 | retained_intron | ||
|
ENSG00000198925 (ATG9A) autophagy related 9A |
ENST00000361242 (ATG9A-003)
|
219220054-219229670 | protein_coding | |
|
ENST00000396761 (ATG9A-001)
|
219219380-219229717 | protein_coding | ||
|
ENST00000409033 (ATG9A-002)
|
219219380-219229626 | nonsense_mediated_decay | ||
|
ENST00000409422 (ATG9A-021)
|
219220447-219229629 | protein_coding | ||
|
ENST00000409618 (ATG9A-004)
|
219219382-219229368 | protein_coding | ||
|
ENST00000412355 (ATG9A-011)
|
219225146-219229636 | nonsense_mediated_decay | ||
|
ENST00000428226 (ATG9A-012)
|
219225078-219229618 | protein_coding | ||
|
ENST00000429920 (ATG9A-023)
|
219221274-219223964 | protein_coding | ||
|
ENST00000431715 (ATG9A-010)
|
219224683-219229639 | protein_coding | ||
|
ENST00000432520 (ATG9A-016)
|
219225153-219229342 | protein_coding | ||
|
ENST00000434939 (ATG9A-019)
|
219225506-219228693 | protein_coding | ||
|
ENST00000436856 (ATG9A-013)
|
219224808-219229618 | protein_coding | ||
|
ENST00000439812 (ATG9A-009)
|
219225194-219229639 | protein_coding | ||
|
ENST00000443140 (ATG9A-018)
|
219225494-219229325 | protein_coding | ||
|
ENST00000446716 (ATG9A-006)
|
219209772-219222738 | nonsense_mediated_decay | ||
|
ENST00000455079 (ATG9A-020)
|
219225415-219229639 | nonsense_mediated_decay | ||
|
ENST00000456708 (ATG9A-007)
|
219225196-219229639 | nonsense_mediated_decay | ||
|
ENST00000457841 (ATG9A-008)
|
219225071-219229639 | protein_coding | ||
|
ENST00000466217 (ATG9A-015)
|
219225332-219229594 | retained_intron | ||
|
ENST00000475339 (ATG9A-022)
|
219220209-219222248 | retained_intron | ||
|
ENST00000486766 (ATG9A-014)
|
219225415-219229606 | retained_intron | ||
|
ENST00000488833 (ATG9A-017)
|
219226874-219229340 | processed_transcript | ||
|
ENSG00000221344 (AC068946.1) |
ENST00000408417 (AC068946.1-201)
|
219224023-219224105 | miRNA | |
| CIL_0006EA_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000026198-ENSMUSG00000033124 | CGP | 10090 | 1:75171717-75192196 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000026198 (Abcb6) ATP-binding cassette, sub-family B (MDR/TAP), member 6 |
ENSMUST00000027396 (Abcb6-001)
|
75171717-75180392 | protein_coding | |
|
ENSMUST00000159219 (Abcb6-004)
|
75172720-75180286 | retained_intron | ||
|
ENSMUST00000160081 (Abcb6-003)
|
75171719-75180286 | retained_intron | ||
|
ENSMUST00000160757 (Abcb6-005)
|
75175552-75178949 | retained_intron | ||
|
ENSMUST00000161103 (Abcb6-002)
|
75177910-75180376 | retained_intron | ||
|
ENSMUST00000161215 (Abcb6-006)
|
75171758-75172869 | protein_coding | ||
|
ENSMUSG00000033124 (Atg9a) autophagy related 9A |
ENSMUST00000040689 (Atg9a-201)
|
75180866-75191923 | protein_coding | |
|
ENSMUST00000186744 (Atg9a-006)
|
75190117-75191714 | protein_coding | ||
|
ENSMUST00000187601 (Atg9a-007)
|
75189769-75191962 | retained_intron | ||
|
ENSMUST00000187785 (Atg9a-008)
|
75182990-75186047 | protein_coding | ||
|
ENSMUST00000188347 (Atg9a-001)
|
75180865-75192196 | protein_coding | ||
|
ENSMUST00000188430 (Atg9a-004)
|
75187557-75191725 | retained_intron | ||
|
ENSMUST00000189665 (Atg9a-003)
|
75180865-75191923 | nonsense_mediated_decay | ||
|
ENSMUST00000189702 (Atg9a-002)
|
75180860-75191926 | protein_coding | ||
|
ENSMUST00000189820 (Atg9a-005)
|
75180865-75190382 | protein_coding | ||
Expression Patterns
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