C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: EF hand domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026255 Efhd1 10090 + 1:87264363-87310839 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027472 Efhd1-001 87264363-87310839 protein_coding
  ENSMUST00000118687 Efhd1-002 87264363-87310836 nonsense_mediated_decay
  ENSMUST00000150831 Efhd1-003 87309226-87309742 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027472ENSMUST00000118687ENSMUST00000150831
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027472 8.342±1.91 117.485±8.82 1.988±0.18 1.950±1.57 14.256±4.70 0.808±0.26 2.611±0.29 57.666±7.97 0.090±0.05 0.694±0.26 1.366±0.31 43.116±18.17 2.218±2.54 159.595±66.93
ENSMUST00000118687 N/A N/A N/A 0.149±0.00 N/A 0.242±0.10 0.513±0.08 N/A 0.024±0.03 0.148±0.00 N/A 6.173±0.00 0.486±0.00 N/A
ENSMUST00000150831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.967±0.94 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003HV CIL_0003HV_0002 CGP 1:87213914-87310839
CIL_0003HW CIL_0003HW_0002 CGP 1:87264363-87450796

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0031175 IMP neuron projection development
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000115468 EFHD1 EF-hand domain family, member D1 protein_coding Homo_sapiens

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