C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: EF hand domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118687 Efhd1-002 ENSMUSG00000026255 10090 + 1:87264363-87310836 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartLiverLungOvaryPlacentaENSMUST00000118687
Transcript ID Brain Colon Heart Liver Lung Ovary Placenta
ENSMUST00000118687 0.149±0.00 0.242±0.10 0.513±0.08 0.024±0.03 0.148±0.00 6.173±0.00 0.486±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003HV CIL_0003HV_0002 CGP 1:87213914-87310839
CIL_0003HW CIL_0003HW_0002 CGP 1:87264363-87450796

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0031175 IMP neuron projection development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264059 EFHD1-001 protein_coding Homo_sapiens 0 682
ENST00000375980 EFHD2-001 protein_coding Homo_sapiens 0 305
ENST00000409613 EFHD1-003 protein_coding Homo_sapiens 0 521
ENST00000409708 EFHD1-002 protein_coding Homo_sapiens 0 525
ENST00000410095 EFHD1-004 protein_coding Homo_sapiens 0 521
ENST00000427698 EFHD1-007 protein_coding Homo_sapiens 0 364
ENST00000442845 EFHD1-006 nonsense_mediated_decay Homo_sapiens 0 525
ENST00000445566 EFHD2-002 protein_coding Homo_sapiens 0 274
ENST00000611312 EFHD1-201 protein_coding Homo_sapiens 0 521

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