C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: integrin-linked kinase-associated serine/threonine phosphatase 2C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026309 Ilkap 10090 - 1:91373861-91398815 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027534 Ilkap-001 91375831-91398783 protein_coding
  ENSMUST00000185886 Ilkap-011 91376011-91378917 retained_intron
  ENSMUST00000186433 Ilkap-007 91385255-91388804 retained_intron
  ENSMUST00000186986 Ilkap-009 91384625-91398785 nonsense_mediated_decay
  ENSMUST00000187049 Ilkap-002 91373861-91398700 nonsense_mediated_decay
  ENSMUST00000187105 Ilkap-004 91375832-91398755 retained_intron
  ENSMUST00000187231 Ilkap-012 91375959-91384573 protein_coding
  ENSMUST00000187306 Ilkap-008 91376054-91398793 protein_coding
  ENSMUST00000187678 Ilkap-006 91376055-91398801 nonsense_mediated_decay
  ENSMUST00000189651 Ilkap-005 91390234-91398794 retained_intron
  ENSMUST00000190519 Ilkap-010 91385344-91398778 protein_coding
  ENSMUST00000190747 Ilkap-013 91373865-91384626 protein_coding
  ENSMUST00000191230 Ilkap-003 91381039-91398815 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027534ENSMUST00000185886ENSMUST00000186986ENSMUST00000187105ENSMUST00000187231ENSMUST00000187306ENSMUST00000187678ENSMUST00000189651ENSMUST00000190519ENSMUST00000191230
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027534 16.728±2.91 13.858±2.98 24.620±1.57 24.970±5.87 13.420±1.54 14.791±2.03 6.803±3.31 14.331±6.33 18.976±12.14 20.378±2.61 22.250±2.99 22.202±7.04 28.344±4.42 6.419±1.62
ENSMUST00000185886 N/A N/A N/A N/A N/A N/A N/A 9.948±0.00 N/A N/A N/A 34.439±0.00 N/A N/A
ENSMUST00000186986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.200±0.00
ENSMUST00000187105 6.108±2.28 4.739±0.00 6.780±0.95 5.068±2.01 3.413±0.51 6.148±0.00 1.956±0.45 2.464±0.27 5.377±2.09 6.395±0.97 N/A 6.779±1.59 5.555±1.32 1.767±0.25
ENSMUST00000187231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.395±1.51 N/A N/A
ENSMUST00000187306 N/A 35.297±16.86 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187678 N/A 17.353±2.46 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189651 N/A 14.310±2.25 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 25.079±0.00
ENSMUST00000191230 N/A 10.405±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.139±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D3 CIL_0008D3_0002 VISTA 1:90908179-91512308
CIL_0003NJ CIL_0003NJ_0002 CGP 1:91351016-91374217
CIL_0003NK CIL_0003NK_0002 CGP 1:91366430-91398815
CIL_0006X3 CIL_0006X3_0002 CGP 1:91373861-91414038

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004722 IEA protein serine/threonine phosphatase activity
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0006470 IEA protein dephosphorylation
GO:0033262 IEA regulation of nuclear cell cycle DNA replication
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040615 ILKAP integrin-linked kinase-associated serine/threonine phosphatase protein_coding Danio_rerio
ENSG00000132323 ILKAP integrin-linked kinase-associated serine/threonine phosphatase protein_coding Homo_sapiens

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