C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: integrin-linked kinase-associated serine/threonine phosphatase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000132323 ILKAP 9606 - 2:238170401-238203729 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000254654 ILKAP-001 238170401-238203729 protein_coding
  ENST00000450411 ILKAP-009 238170408-238184096 protein_coding
  ENST00000457149 ILKAP-004 238183723-238203708 protein_coding
  ENST00000463129 ILKAP-002 238170402-238203638 retained_intron
  ENST00000465131 ILKAP-010 238170402-238173926 retained_intron
  ENST00000466468 ILKAP-003 238170409-238187057 retained_intron
  ENST00000467133 ILKAP-006 238189698-238203695 retained_intron
  ENST00000479400 ILKAP-008 238183716-238188594 retained_intron
  ENST00000490837 ILKAP-005 238194409-238203695 processed_transcript
  ENST00000498727 ILKAP-007 238189691-238203680 retained_intron
  ENST00000612675 ILKAP-201 238170403-238203683 protein_coding
  ENST00000622223 ILKAP-202 238170403-238203683 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000254654ENST00000450411ENST00000457149ENST00000463129ENST00000466468ENST00000467133ENST00000612675
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000254654 6.221±0.00 N/A 1.352±0.00 7.804±3.94 7.558±0.00 5.531±2.89 1.156±0.56 14.645±0.00 4.142±2.01 8.218±0.00 15.822±0.00 14.737±6.15 11.298±3.68 15.169±11.09
ENST00000450411 N/A 5.334±0.00 N/A N/A 4.689±0.00 N/A N/A N/A N/A N/A N/A 6.171±0.00 N/A N/A
ENST00000457149 N/A N/A N/A N/A N/A N/A 2.837±0.00 N/A N/A N/A 2.476±0.00 N/A N/A N/A
ENST00000463129 N/A N/A N/A 1.117±0.00 N/A N/A 0.439±0.00 N/A 0.951±0.00 N/A N/A 1.136±0.00 N/A 2.470±0.00
ENST00000466468 0.598±0.00 1.786±0.00 N/A N/A N/A 1.028±0.00 0.297±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000467133 N/A N/A N/A N/A 2.842±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612675 N/A 10.218±0.00 N/A N/A N/A 3.098±0.00 1.982±1.50 N/A N/A N/A N/A 11.510±0.00 4.990±0.00 11.845±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D3 CIL_0008D3_0001 VISTA 2:237594726-238198955
CIL_0003NK CIL_0003NK_0001 CGP 2:238158982-238203729
CIL_0006X3 CIL_0006X3_0001 CGP 2:238170401-238240662

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004722 IEA protein serine/threonine phosphatase activity
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0006470 IEA protein dephosphorylation
GO:0008152 IEA metabolic process
GO:0033262 IEA regulation of nuclear cell cycle DNA replication
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040615 ILKAP integrin-linked kinase-associated serine/threonine phosphatase protein_coding Danio_rerio
ENSMUSG00000026309 Ilkap integrin-linked kinase-associated serine/threonine phosphatase 2C protein_coding Mus_musculus

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