C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006X3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000132323-ENSG00000144485 CGP 9606 2:238170401-238240662
GeneTranscriptPositionBiotype
ENSG00000132323 (ILKAP)
integrin-linked kinase-associated serine/threonine phosphatase 		ENST00000254654 (ILKAP-001) 238170401-238203729 protein_coding
ENST00000450411 (ILKAP-009) 238170408-238184096 protein_coding
ENST00000457149 (ILKAP-004) 238183723-238203708 protein_coding
ENST00000463129 (ILKAP-002) 238170402-238203638 retained_intron
ENST00000465131 (ILKAP-010) 238170402-238173926 retained_intron
ENST00000466468 (ILKAP-003) 238170409-238187057 retained_intron
ENST00000467133 (ILKAP-006) 238189698-238203695 retained_intron
ENST00000479400 (ILKAP-008) 238183716-238188594 retained_intron
ENST00000490837 (ILKAP-005) 238194409-238203695 processed_transcript
ENST00000498727 (ILKAP-007) 238189691-238203680 retained_intron
ENST00000612675 (ILKAP-201) 238170403-238203683 protein_coding
ENST00000622223 (ILKAP-202) 238170403-238203683 protein_coding
ENSG00000144485 (HES6)
hes family bHLH transcription factor 6 		ENST00000272937 (HES6-001) 238238267-238240124 protein_coding
ENST00000409002 (HES6-002) 238238276-238239971 protein_coding
ENST00000409160 (HES6-003) 238238270-238240038 protein_coding
ENST00000409182 (HES6-006) 238238605-238239958 protein_coding
ENST00000409356 (HES6-007) 238239170-238240024 protein_coding
ENST00000409574 (HES6-005) 238238860-238240041 protein_coding
ENST00000417803 (HES6-009) 238238776-238239671 protein_coding
ENST00000436051 (HES6-004) 238239180-238240662 protein_coding
ENST00000450098 (HES6-008) 238239216-238240001 protein_coding
ENSG00000186235 (AC016757.3)
 ENST00000409070 (AC016757.3-006) 238225116-238231431 lincRNA
ENST00000409376 (AC016757.3-002) 238225113-238231370 lincRNA
ENST00000409942 (AC016757.3-005) 238225116-238231525 lincRNA
ENST00000466075 (AC016757.3-003) 238227545-238231677 retained_intron
ENST00000470346 (AC016757.3-001) 238225120-238231613 lincRNA
ENST00000475669 (AC016757.3-004) 238224552-238231585 lincRNA
CIL_0006X3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026309-ENSMUSG00000067071 CGP 10090 1:91373861-91414038
GeneTranscriptPositionBiotype
ENSMUSG00000026309 (Ilkap)
integrin-linked kinase-associated serine/threonine phosphatase 2C 		ENSMUST00000027534 (Ilkap-001) 91375831-91398783 protein_coding
ENSMUST00000185886 (Ilkap-011) 91376011-91378917 retained_intron
ENSMUST00000186433 (Ilkap-007) 91385255-91388804 retained_intron
ENSMUST00000186986 (Ilkap-009) 91384625-91398785 nonsense_mediated_decay
ENSMUST00000187049 (Ilkap-002) 91373861-91398700 nonsense_mediated_decay
ENSMUST00000187105 (Ilkap-004) 91375832-91398755 retained_intron
ENSMUST00000187231 (Ilkap-012) 91375959-91384573 protein_coding
ENSMUST00000187306 (Ilkap-008) 91376054-91398793 protein_coding
ENSMUST00000187678 (Ilkap-006) 91376055-91398801 nonsense_mediated_decay
ENSMUST00000189651 (Ilkap-005) 91390234-91398794 retained_intron
ENSMUST00000190519 (Ilkap-010) 91385344-91398778 protein_coding
ENSMUST00000190747 (Ilkap-013) 91373865-91384626 protein_coding
ENSMUST00000191230 (Ilkap-003) 91381039-91398815 processed_transcript
ENSMUSG00000047443 (Fam132b)
family with sequence similarity 132, member B 		ENSMUST00000086861 (Fam132b-001) 91366430-91374217 protein_coding
ENSMUST00000190998 (Fam132b-002) 91370694-91374092 protein_coding
ENSMUSG00000067071 (Hes6)
hairy and enhancer of split 6 		ENSMUST00000086851 (Hes6-001) 91411483-91413222 protein_coding
ENSMUST00000126136 (Hes6-005) 91411483-91413222 retained_intron
ENSMUST00000132188 (Hes6-004) 91411483-91413208 retained_intron
ENSMUST00000150520 (Hes6-002) 91412348-91414038 processed_transcript
ENSMUST00000155752 (Hes6-003) 91412287-91413208 retained_intron
ENSMUSG00000100253 (RP24-503F14.1)
RIKEN cDNA 1700020N18 gene 		ENSMUST00000188956 (RP24-503F14.1-001) 91404879-91406029 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006X3_0001ENSG00000132323ENST00000254654ENST00000450411ENST00000457149ENST00000463129ENST00000465131ENST00000466468ENST00000467133ENST00000479400ENST00000490837ENST00000498727ENST00000612675ENST00000622223ENSG00000144485ENST00000272937ENST00000409002ENST00000409160ENST00000409182ENST00000409356ENST00000409574ENST00000417803ENST00000436051ENST00000450098ENSG00000186235ENST00000409070ENST00000409376ENST00000409942ENST00000466075ENST00000470346ENST00000475669CIL_0006X3_0002ENSMUSG00000026309ENSMUST00000027534ENSMUST00000185886ENSMUST00000186433ENSMUST00000186986ENSMUST00000187049ENSMUST00000187105ENSMUST00000187231ENSMUST00000187306ENSMUST00000187678ENSMUST00000189651ENSMUST00000190519ENSMUST00000190747ENSMUST00000191230ENSMUSG00000047443ENSMUST00000086861ENSMUST00000190998ENSMUSG00000067071ENSMUST00000086851ENSMUST00000126136ENSMUST00000132188ENSMUST00000150520ENSMUST00000155752ENSMUSG00000100253ENSMUST00000188956
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006X3_0001ENSG00000132323ENST00000254654ENST00000450411ENST00000457149ENST00000463129ENST00000466468ENST00000467133ENST00000612675ENSG00000144485ENST00000272937ENST00000409002ENST00000409160ENST00000409182ENST00000409356ENST00000409574ENST00000417803ENSG00000186235ENST00000409070ENST00000409376ENST00000409942ENST00000466075ENST00000470346ENST00000475669CIL_0006X3_0002ENSMUSG00000026309ENSMUST00000027534ENSMUST00000185886ENSMUST00000186986ENSMUST00000187105ENSMUST00000187231ENSMUST00000187306ENSMUST00000187678ENSMUST00000189651ENSMUST00000190519ENSMUST00000191230ENSMUSG00000047443ENSMUST00000086861ENSMUSG00000067071ENSMUST00000086851ENSMUST00000126136ENSMUST00000132188ENSMUST00000150520ENSMUST00000155752ENSMUSG00000100253ENSMUST00000188956
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132323 ENST00000254654 6.221±0.00 N/A 1.352±0.00 7.804±3.94 7.558±0.00 5.531±2.89 1.156±0.56 14.645±0.00 4.142±2.01 8.218±0.00 15.822±0.00 14.737±6.15 11.298±3.68 15.169±11.09
ENST00000450411 N/A 5.334±0.00 N/A N/A 4.689±0.00 N/A N/A N/A N/A N/A N/A 6.171±0.00 N/A N/A
ENST00000457149 N/A N/A N/A N/A N/A N/A 2.837±0.00 N/A N/A N/A 2.476±0.00 N/A N/A N/A
ENST00000463129 N/A N/A N/A 1.117±0.00 N/A N/A 0.439±0.00 N/A 0.951±0.00 N/A N/A 1.136±0.00 N/A 2.470±0.00
ENST00000465131 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466468 0.598±0.00 1.786±0.00 N/A N/A N/A 1.028±0.00 0.297±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000467133 N/A N/A N/A N/A 2.842±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490837 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612675 N/A 10.218±0.00 N/A N/A N/A 3.098±0.00 1.982±1.50 N/A N/A N/A N/A 11.510±0.00 4.990±0.00 11.845±0.00
ENST00000622223 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000144485 ENST00000272937 N/A N/A N/A N/A 1.119±0.00 0.673±0.00 N/A N/A N/A 0.340±0.00 N/A 5.506±0.00 1.237±0.37 N/A
ENST00000409002 0.871±0.00 2.196±0.00 0.186±0.00 11.075±5.23 0.869±0.00 6.084±0.00 N/A N/A 0.922±0.47 3.545±0.00 1.178±0.00 6.459±2.58 0.611±0.00 7.727±0.30
ENST00000409160 N/A 0.628±0.00 N/A 0.651±0.00 0.370±0.00 1.135±0.59 0.925±0.00 1.108±0.00 N/A N/A N/A 4.136±4.88 N/A 2.853±0.00
ENST00000409182 N/A 0.781±0.00 N/A N/A N/A N/A 0.192±0.00 N/A N/A N/A N/A 1.748±0.00 0.534±0.00 10.982±0.00
ENST00000409356 N/A N/A N/A N/A N/A 0.529±0.00 2.192±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000409574 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.322±0.00 0.712±0.00 N/A N/A N/A
ENST00000417803 0.864±0.00 N/A N/A N/A N/A 0.652±0.00 N/A 2.355±0.00 N/A N/A N/A N/A N/A N/A
ENST00000436051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000186235 ENST00000409070 N/A N/A N/A N/A N/A 0.323±0.00 N/A N/A N/A N/A N/A 0.395±0.00 N/A 2.190±0.00
ENST00000409376 N/A 0.168±0.00 N/A 0.141±0.00 N/A N/A N/A 0.226±0.00 N/A N/A N/A N/A N/A N/A
ENST00000409942 0.043±0.00 0.235±0.00 N/A 1.702±0.00 N/A N/A N/A N/A 0.185±0.00 N/A 0.171±0.00 0.231±0.05 0.198±0.00 2.901±0.00
ENST00000466075 N/A N/A N/A 0.352±0.00 N/A 0.211±0.00 N/A N/A N/A N/A N/A 0.375±0.00 0.168±0.01 N/A
ENST00000470346 0.026±0.00 0.117±0.00 N/A 0.527±0.23 0.045±0.00 0.043±0.00 0.041±0.00 N/A N/A 0.041±0.00 N/A 0.249±0.14 0.040±0.00 2.670±1.78
ENST00000475669 N/A N/A N/A N/A N/A 0.095±0.00 N/A N/A N/A N/A N/A N/A 0.561±0.00 1.945±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026309 ENSMUST00000027534 16.728±2.91 13.858±2.98 24.620±1.57 24.970±5.87 13.420±1.54 14.791±2.03 6.803±3.31 14.331±6.33 18.976±12.14 20.378±2.61 22.250±2.99 22.202±7.04 28.344±4.42 6.419±1.62
ENSMUST00000185886 N/A N/A N/A N/A N/A N/A N/A 9.948±0.00 N/A N/A N/A 34.439±0.00 N/A N/A
ENSMUST00000186433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.200±0.00
ENSMUST00000187049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187105 6.108±2.28 4.739±0.00 6.780±0.95 5.068±2.01 3.413±0.51 6.148±0.00 1.956±0.45 2.464±0.27 5.377±2.09 6.395±0.97 N/A 6.779±1.59 5.555±1.32 1.767±0.25
ENSMUST00000187231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.395±1.51 N/A N/A
ENSMUST00000187306 N/A 35.297±16.86 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187678 N/A 17.353±2.46 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189651 N/A 14.310±2.25 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 25.079±0.00
ENSMUST00000190747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191230 N/A 10.405±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.139±0.00 N/A N/A
ENSMUSG00000047443 ENSMUST00000086861 N/A 1.560±0.00 N/A N/A N/A 5.953±1.22 N/A N/A 2.942±0.00 N/A N/A N/A N/A 0.786±0.00
ENSMUST00000190998 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000067071 ENSMUST00000086851 8.930±1.58 73.972±15.21 7.685±0.63 30.914±20.62 9.032±3.30 41.944±3.09 5.561±3.53 23.790±0.43 27.136±16.06 13.022±2.84 3.882±0.80 16.701±4.14 7.672±2.41 1.467±0.45
ENSMUST00000126136 5.208±1.21 40.275±5.17 4.536±1.31 19.056±16.63 8.179±3.26 21.179±1.82 2.095±0.71 4.839±0.44 5.552±1.75 8.734±1.44 1.054±0.35 7.238±1.81 1.628±0.63 0.622±0.26
ENSMUST00000132188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.337±0.00
ENSMUST00000150520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.135±3.48 N/A N/A
ENSMUST00000155752 N/A 43.317±2.93 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000100253 ENSMUST00000188956 N/A N/A 0.061±0.00 0.120±0.08 0.090±0.00 0.307±0.14 0.121±0.00 0.083±0.03 N/A 0.514±0.15 N/A 0.271±0.08 N/A 26.074±2.73

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