C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear receptor subfamily 5, group A, member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026398 Nr5a2 10090 - 1:136843584-136960427 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027649 Nr5a2-201 136843584-136960427 protein_coding
  ENSMUST00000168126 Nr5a2-202 136843584-136953630 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027649ENSMUST00000168126
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027649 N/A N/A 1.701±0.41 N/A N/A 3.835±1.19 N/A N/A 9.146±0.00 N/A N/A
ENSMUST00000168126 0.017±0.00 0.998±0.57 2.000±0.35 0.129±0.07 0.131±0.00 N/A 0.069±0.01 0.062±0.02 24.482±10.09 0.304±0.10 0.083±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007MU CIL_0007MU_0002 UCNEbase 1:136590245-137142145

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 IDA DNA binding
GO:0003700 ISS sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0005515 IEA protein binding
GO:0005543 IEA phospholipid binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0006351 IEA transcription, DNA-templated
GO:0006355 ISS regulation of transcription, DNA-templated
GO:0008206 IMP bile acid metabolic process
GO:0008270 IEA zinc ion binding
GO:0031018 TAS endocrine pancreas development
GO:0042127 IGI regulation of cell proliferation
GO:0042632 IMP cholesterol homeostasis
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0044212 IEA transcription regulatory region DNA binding
GO:0045070 IEA positive regulation of viral genome replication
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0045944 IMP:IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042556 nr5a2 nuclear receptor subfamily 5, group A, member 2 protein_coding Danio_rerio
ENSG00000116833 NR5A2 nuclear receptor subfamily 5, group A, member 2 protein_coding Homo_sapiens

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