C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: neutrophil cytosolic factor 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026480 Ncf2 10090 + 1:152800194-152836991 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027754 Ncf2-201 152807890-152836990 protein_coding
  ENSMUST00000186568 Ncf2-001 152800194-152836991 protein_coding
  ENSMUST00000187235 Ncf2-005 152823569-152824484 retained_intron
  ENSMUST00000187641 Ncf2-002 152807978-152812638 retained_intron
  ENSMUST00000189135 Ncf2-004 152810890-152824291 retained_intron
  ENSMUST00000190323 Ncf2-003 152807837-152824292 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027754ENSMUST00000186568ENSMUST00000187641ENSMUST00000189135
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027754 4.485±0.87 1.502±0.20 1.617±0.54 0.557±0.07 6.511±2.23 5.227±1.09 1.119±0.49 1.167±0.34 3.785±3.99 8.132±0.49 0.420±0.35 4.628±1.38 2.017±0.50 0.121±0.05
ENSMUST00000186568 0.666±0.00 N/A N/A N/A 1.030±0.08 1.402±0.35 0.100±0.00 N/A 0.072±0.02 N/A 0.076±0.01 0.850±0.26 0.325±0.01 0.053±0.02
ENSMUST00000187641 N/A N/A N/A 0.037±0.00 N/A N/A N/A N/A 0.068±0.00 N/A 0.024±0.00 N/A N/A 0.056±0.02
ENSMUST00000189135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.535±0.00 N/A N/A 0.497±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001669 IDA acrosomal vesicle
GO:0005515 IPI protein binding
GO:0005730 IEA nucleolus
GO:0005737 IDA cytoplasm
GO:0005829 ISA cytosol
GO:0006742 ISA NADP catabolic process
GO:0006801 ISA superoxide metabolic process
GO:0007568 IEA aging
GO:0008022 IEA protein C-terminus binding
GO:0009749 IEA response to glucose
GO:0014070 IEA response to organic cyclic compound
GO:0014823 IEA response to activity
GO:0016020 IEA membrane
GO:0016175 ISA superoxide-generating NADPH oxidase activity
GO:0032496 IEA response to lipopolysaccharide
GO:0032570 IEA response to progesterone
GO:0032870 IEA cellular response to hormone stimulus
GO:0033993 IEA response to lipid
GO:0034616 IEA response to laminar fluid shear stress
GO:0042493 IEA response to drug
GO:0042554 IDA superoxide anion generation
GO:0043525 IEA positive regulation of neuron apoptotic process
GO:0045777 IEA positive regulation of blood pressure
GO:0048365 IPI Rac GTPase binding
GO:0055093 IEA response to hyperoxia
GO:0055114 ISA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005821 ncf2 neutrophil cytosolic factor 2 protein_coding Danio_rerio
ENSG00000116701 NCF2 neutrophil cytosolic factor 2 protein_coding Homo_sapiens

Loading