C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neutrophil cytosolic factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000186568 Ncf2-001 ENSMUSG00000026480 10090 + 1:152800194-152836991 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartLiverMuscleOvaryPlacentaTestisENSMUST00000186568
Transcript ID Adipose Breast Colon Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000186568 0.666±0.00 1.030±0.08 1.402±0.35 0.100±0.00 0.072±0.02 0.076±0.01 0.850±0.26 0.325±0.01 0.053±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001669 IDA acrosomal vesicle
GO:0005515 IPI protein binding
GO:0005730 IEA nucleolus
GO:0005737 IDA cytoplasm
GO:0005829 ISA cytosol
GO:0006742 ISA NADP catabolic process
GO:0006801 ISA superoxide metabolic process
GO:0007568 IEA aging
GO:0008022 IEA protein C-terminus binding
GO:0009749 IEA response to glucose
GO:0014070 IEA response to organic cyclic compound
GO:0014823 IEA response to activity
GO:0016020 IEA membrane
GO:0016175 ISA superoxide-generating NADPH oxidase activity
GO:0032496 IEA response to lipopolysaccharide
GO:0032570 IEA response to progesterone
GO:0032870 IEA cellular response to hormone stimulus
GO:0033993 IEA response to lipid
GO:0034616 IEA response to laminar fluid shear stress
GO:0042493 IEA response to drug
GO:0042554 IDA superoxide anion generation
GO:0043525 IEA positive regulation of neuron apoptotic process
GO:0045777 IEA positive regulation of blood pressure
GO:0048365 IPI Rac GTPase binding
GO:0055093 IEA response to hyperoxia
GO:0055114 ISA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367535 NCF2-002 protein_coding Homo_sapiens 0 1535
ENST00000367536 NCF2-001 protein_coding Homo_sapiens 0 1535
ENST00000413720 NCF2-201 protein_coding Homo_sapiens 0 996
ENST00000418089 NCF2-202 protein_coding Homo_sapiens 0 885
ENST00000469280 NCF2-003 processed_transcript Homo_sapiens 0 289

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