C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: neutrophil cytosolic factor 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000116701 NCF2 9606 - 1:183555563-183590876 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000367535 NCF2-002 183555725-183590581 protein_coding
  ENST00000367536 NCF2-001 183555563-183590876 protein_coding
  ENST00000413720 NCF2-201 183555563-183590604 protein_coding
  ENST00000418089 NCF2-202 183555563-183590604 protein_coding
  ENST00000419402 NCF2-004 183563272-183569225 protein_coding
  ENST00000420553 NCF2-005 183563269-183569225 protein_coding
  ENST00000469280 NCF2-003 183560246-183564051 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000367535ENST00000367536ENST00000413720ENST00000418089
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000367535 N/A N/A 0.756±0.00 0.137±0.00 3.138±0.00 1.050±0.00 0.765±0.00 0.405±0.00 2.258±0.00 11.672±0.66 0.663±0.00 1.352±0.75 5.318±2.82 0.358±0.00
ENST00000367536 4.632±0.00 2.021±0.00 0.108±0.00 1.311±0.00 2.596±1.90 1.356±1.20 0.681±0.00 0.642±0.12 0.870±0.00 6.856±0.00 1.487±0.00 2.386±0.24 5.869±0.68 1.535±0.00
ENST00000413720 2.027±0.00 1.541±0.00 N/A 0.256±0.05 N/A N/A 0.736±0.00 N/A N/A N/A N/A 0.586±0.00 N/A N/A
ENST00000418089 N/A N/A N/A N/A N/A N/A N/A N/A 0.786±0.00 4.784±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001BJ CIL_0001BJ_0002 CGP 1:183248237-183598246

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001669 IEA acrosomal vesicle
GO:0002474 TAS antigen processing and presentation of peptide antigen via MHC class I
GO:0002479 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0005515 IPI:IEA protein binding
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0006801 TAS superoxide metabolic process
GO:0006968 TAS cellular defense response
GO:0007568 IEA aging
GO:0008022 IPI protein C-terminus binding
GO:0009055 TAS electron carrier activity
GO:0009749 IEA response to glucose
GO:0014070 IEA response to organic cyclic compound
GO:0014823 IEA response to activity
GO:0016020 IEA membrane
GO:0032010 TAS phagolysosome
GO:0032496 IEA response to lipopolysaccharide
GO:0032570 IEA response to progesterone
GO:0032870 IEA cellular response to hormone stimulus
GO:0033993 IEA response to lipid
GO:0034616 IEA response to laminar fluid shear stress
GO:0042493 IEA response to drug
GO:0042554 TAS superoxide anion generation
GO:0042590 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I
GO:0043020 TAS NADPH oxidase complex
GO:0043525 IEA positive regulation of neuron apoptotic process
GO:0045087 TAS innate immune response
GO:0045730 TAS respiratory burst
GO:0045777 IEA positive regulation of blood pressure
GO:0048365 IEA Rac GTPase binding
GO:0051701 TAS interaction with host
GO:0055093 IEA response to hyperoxia
GO:0090382 TAS phagosome maturation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005821 ncf2 neutrophil cytosolic factor 2 protein_coding Danio_rerio
ENSMUSG00000026480 Ncf2 neutrophil cytosolic factor 2 protein_coding Mus_musculus

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