C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026484 Rnf2 10090 - 1:151458004-151500955 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000076110 Rnf2-001 151469406-151500955 protein_coding
  ENSMUST00000185945 Rnf2-006 151471319-151474119 processed_transcript
  ENSMUST00000186415 Rnf2-004 151471122-151500833 protein_coding
  ENSMUST00000187048 Rnf2-002 151469405-151500811 protein_coding
  ENSMUST00000187991 Rnf2-005 151476901-151500794 protein_coding
  ENSMUST00000188871 Rnf2-007 151471154-151472031 retained_intron
  ENSMUST00000190070 Rnf2-003 151458004-151476162 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000076110ENSMUST00000185945
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000076110 5.785±1.64 6.961±1.25 12.317±2.32 15.422±12.91 5.104±1.36 4.264±0.74 2.382±0.06 4.638±1.01 6.153±3.52 5.106±0.57 3.994±0.26 8.277±1.57 18.010±8.22 6.657±1.30
ENSMUST00000185945 14.634±3.02 N/A N/A N/A 17.958±7.46 N/A N/A N/A N/A N/A N/A 24.371±4.52 49.289±0.00 23.313±3.13

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0000151 ISS ubiquitin ligase complex
GO:0000278 IMP mitotic cell cycle
GO:0000791 IDA euchromatin
GO:0000792 IDA heterochromatin
GO:0001702 IMP gastrulation with mouth forming second
GO:0001739 IDA sex chromatin
GO:0003682 IDA chromatin binding
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0008270 ISS zinc ion binding
GO:0009948 IMP anterior/posterior axis specification
GO:0016574 IGI histone ubiquitination
GO:0016604 IDA nuclear body
GO:0016874 IEA ligase activity
GO:0031519 IDA PcG protein complex
GO:0035102 IEA PRC1 complex
GO:0035518 IEA histone H2A monoubiquitination
GO:0036353 IMP histone H2A-K119 monoubiquitination
GO:0071339 ISS MLL1 complex
GO:0071535 IEA RING-like zinc finger domain binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010381 rnf2 ring finger protein 2 protein_coding Danio_rerio
ENSG00000121481 RNF2 ring finger protein 2 protein_coding Homo_sapiens

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