C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: AT hook containing transcription factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027768 Ahctf1-001 ENSMUSG00000026491 10090 - 1:179744894-179803680 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027768
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027768 3.070±1.36 0.887±0.58 5.145±0.29 6.701±1.59 2.817±0.90 2.098±0.31 1.367±0.40 3.283±0.23 6.480±4.40 3.143±1.31 3.793±1.05 4.546±2.33 14.110±5.48 11.093±5.91

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000777 ISS condensed chromosome kinetochore
GO:0000785 ISS chromatin
GO:0000910 ISS cytokinesis
GO:0003677 IEA DNA binding
GO:0003700 IMP sequence-specific DNA binding transcription factor activity
GO:0005634 ISS nucleus
GO:0005643 ISS nuclear pore
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0007067 IEA mitotic nuclear division
GO:0015031 IEA protein transport
GO:0016363 IDA nuclear matrix
GO:0030097 TAS hemopoiesis
GO:0031080 ISS nuclear pore outer ring
GO:0031965 IEA nuclear membrane
GO:0045893 TAS positive regulation of transcription, DNA-templated
GO:0051028 IEA mRNA transport
GO:0051292 ISS nuclear pore complex assembly
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326225 AHCTF1-002 protein_coding Homo_sapiens 0 3829
ENST00000366508 AHCTF1-001 protein_coding Homo_sapiens 0 3827
ENST00000420969 AHCTF1P1-001 processed_pseudogene Homo_sapiens 0 3755
ENST00000470300 AHCTF1-003 processed_transcript Homo_sapiens 0 1812
ENST00000478568 AHCTF1-005 protein_coding Homo_sapiens 0 263
ENST00000483900 AHCTF1-004 processed_transcript Homo_sapiens 0 726

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