C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transcription factor B2, mitochondrial
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026492 Tfb2m 10090 - 1:179528055-179546267 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027769 Tfb2m-001 179528055-179546267 protein_coding
  ENSMUST00000129009 Tfb2m-005 179533655-179545892 processed_transcript
  ENSMUST00000129982 Tfb2m-003 179531328-179546217 processed_transcript
  ENSMUST00000139993 Tfb2m-002 179529293-179533697 processed_transcript
  ENSMUST00000150778 Tfb2m-004 179528932-179533667 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027769ENSMUST00000129982
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027769 6.264±1.76 4.248±1.87 11.090±0.62 5.493±2.80 4.512±2.54 5.388±2.01 6.280±2.12 8.321±1.65 4.916±1.41 4.823±1.74 10.875±0.51 4.804±2.13 4.502±2.25 1.767±0.79
ENSMUST00000129982 3.206±0.82 4.991±1.97 N/A 6.037±0.00 3.195±0.00 2.306±0.22 3.553±0.00 4.573±1.39 3.301±0.89 2.822±0.00 N/A 4.773±1.88 7.214±1.41 1.441±0.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007AO CIL_0007AO_0003 CGP 1:178951960-179546267
CIL_0007AN CIL_0007AN_0003 CGP 1:179528055-179627478

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000179 IEA rRNA (adenine-N6,N6-)-dimethyltransferase activity
GO:0003712 IEA transcription cofactor activity
GO:0003723 IEA RNA binding
GO:0005739 IDA mitochondrion
GO:0006391 ISS transcription initiation from mitochondrial promoter
GO:0031167 IEA rRNA methylation
GO:0045893 ISS positive regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074756 tfb2m transcription factor B2, mitochondrial protein_coding Danio_rerio
ENSG00000162851 TFB2M transcription factor B2, mitochondrial protein_coding Homo_sapiens

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