C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transcription factor B2, mitochondrial
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000162851 TFB2M 9606 - 1:246540560-246566324 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000366514 TFB2M-001 246540560-246566324 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000366514
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000366514 1.908±0.00 3.538±0.00 1.397±0.00 2.081±0.29 4.464±0.00 2.478±0.25 2.437±2.26 4.717±0.91 5.758±4.03 1.694±0.38 2.982±0.94 3.308±0.90 3.264±0.49 4.847±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007AO CIL_0007AO_0002 CGP 1:245749342-246566324
CIL_0007AN CIL_0007AN_0002 CGP 1:246540560-246668584

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000154 IEA rRNA modification
GO:0000179 IEA rRNA (adenine-N6,N6-)-dimethyltransferase activity
GO:0003712 IDA:IEA transcription cofactor activity
GO:0005739 IEA mitochondrion
GO:0005759 IDA mitochondrial matrix
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006390 IDA transcription from mitochondrial promoter
GO:0006391 IDA:IEA transcription initiation from mitochondrial promoter
GO:0008649 IEA rRNA methyltransferase activity
GO:0010467 TAS gene expression
GO:0031167 IEA rRNA methylation
GO:0042645 IDA mitochondrial nucleoid
GO:0044822 IDA poly(A) RNA binding
GO:0045893 IDA positive regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074756 tfb2m transcription factor B2, mitochondrial protein_coding Danio_rerio
ENSMUSG00000026492 Tfb2m transcription factor B2, mitochondrial protein_coding Mus_musculus
ENSMUSG00000091277 Gm1818 predicted gene 1818 protein_coding Mus_musculus

Loading