C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: serologically defined colon cancer antigen 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026504 Sdccag8 10090 + 1:176814660-177020437 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027785 Sdccag8-001 176814660-177020437 protein_coding
  ENSMUST00000056773 Sdccag8-005 176814660-176862127 protein_coding
  ENSMUST00000123409 Sdccag8-003 176814660-177020437 nonsense_mediated_decay
  ENSMUST00000133305 Sdccag8-004 176814660-176956360 retained_intron
  ENSMUST00000139589 Sdccag8-006 176998009-177020437 processed_transcript
  ENSMUST00000150429 Sdccag8-002 176814660-176845497 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000027785ENSMUST00000056773ENSMUST00000133305ENSMUST00000139589
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000027785 1.949±0.00 1.486±0.17 3.845±0.13 1.954±0.29 1.064±0.01 1.005±0.15 1.502±0.25 1.136±0.57 2.437±0.31 2.800±2.08 5.764±5.12 25.333±36.81
ENSMUST00000056773 N/A 2.644±0.00 N/A N/A 1.147±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133305 N/A N/A N/A N/A N/A N/A N/A 0.330±0.12 N/A N/A N/A 2.311±0.44
ENSMUST00000139589 N/A N/A N/A N/A N/A N/A 6.697±0.87 N/A N/A 5.303±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000L3 CIL_0000L3_0003 CGP 1:176733653-177020437
CIL_0006TO CIL_0006TO_0002 CGP 1:176814660-177258203

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005813 IDA centrosome
GO:0005814 ISS centriole
GO:0005911 IEA cell-cell junction
GO:0030010 IMP establishment of cell polarity
GO:0035148 IMP tube formation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078947 sdccag8 serologically defined colon cancer antigen 8 protein_coding Danio_rerio
ENSG00000054282 SDCCAG8 serologically defined colon cancer antigen 8 protein_coding Homo_sapiens

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