C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serologically defined colon cancer antigen 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027785 Sdccag8-001 ENSMUSG00000026504 10090 + 1:176814660-177020437 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000027785
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000027785 1.949±0.00 1.486±0.17 3.845±0.13 1.954±0.29 1.064±0.01 1.005±0.15 1.502±0.25 1.136±0.57 2.437±0.31 2.800±2.08 5.764±5.12 25.333±36.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000L3 CIL_0000L3_0003 CGP 1:176733653-177020437
CIL_0006TO CIL_0006TO_0002 CGP 1:176814660-177258203

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005813 IDA centrosome
GO:0005814 ISS centriole
GO:0005911 IEA cell-cell junction
GO:0030010 IMP establishment of cell polarity
GO:0035148 IMP tube formation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263826 AKT3-201 protein_coding Homo_sapiens 0 207
ENST00000336199 AKT3-002 protein_coding Homo_sapiens 0.00000005 64
ENST00000366540 AKT3-007 protein_coding Homo_sapiens 0.00000005 64
ENST00000366541 SDCCAG8-001 protein_coding Homo_sapiens 0 1871
ENST00000435549 SDCCAG8-002 protein_coding Homo_sapiens 0 756
ENST00000463012 SDCCAG8-008 processed_transcript Homo_sapiens 0 265
ENST00000493334 SDCCAG8-004 processed_transcript Homo_sapiens 0 592
ENST00000497459 SDCCAG8-010 processed_transcript Homo_sapiens 0 329
ENST00000613395 AKT3-202 protein_coding Homo_sapiens 0.00000005 64
ENST00000619536 AKT3-203 protein_coding Homo_sapiens 0.00000005 64
ENST00000621586 AKT3-204 protein_coding Homo_sapiens 0 207
ENST00000622598 SDCCAG8-201 protein_coding Homo_sapiens 0 1886

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