C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calpain 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026509 Capn2 10090 - 1:182467256-182517495 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000068505 Capn2-201 182467256-182517495 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000068505
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000068505 43.506±7.98 11.344±5.28 35.672±8.11 16.610±4.17 22.070±4.01 15.378±1.41 13.010±1.00 15.737±1.76 6.161±1.79 34.794±2.27 15.067±0.90 16.161±11.52 32.966±5.08 1.510±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005MP CIL_0005MP_0002 CGP 1:182467256-182632352

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000785 IDA chromatin
GO:0001666 IEA response to hypoxia
GO:0001824 IMP blastocyst development
GO:0004198 TAS calcium-dependent cysteine-type endopeptidase activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005829 ISS cytosol
GO:0005886 ISS plasma membrane
GO:0005925 IEA focal adhesion
GO:0006508 IDA proteolysis
GO:0007520 IMP myoblast fusion
GO:0008092 IEA cytoskeletal protein binding
GO:0008233 IDA peptidase activity
GO:0016540 IEA protein autoprocessing
GO:0030425 IEA dendrite
GO:0031143 IEA pseudopodium
GO:0045121 ISS membrane raft
GO:0046982 IEA protein heterodimerization activity
GO:0051493 IEA regulation of cytoskeleton organization
GO:0070062 IEA extracellular vesicular exosome
GO:0071230 IDA cellular response to amino acid stimulus
GO:0097038 IEA perinuclear endoplasmic reticulum

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034211 capn2l calpain 2, (m/II) large subunit, like protein_coding Danio_rerio
ENSDARG00000055592 capn2b calpain 2, (m/II) large subunit b protein_coding Danio_rerio
ENSDARG00000090014 CAPN2 (3 of 4) calpain 2, (m/II) large subunit protein_coding Danio_rerio
ENSDARG00000091699 capn2a calpain 2, (m/II) large subunit a protein_coding Danio_rerio
ENSG00000162909 CAPN2 calpain 2, (m/II) large subunit protein_coding Homo_sapiens

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