C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: selectin, endothelial cell
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026582 Sele 10090 + 1:164048234-164057677 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027874 Sele-201 164048234-164057677 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000027874
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000027874 0.172±0.15 0.942±0.37 1.345±0.00 0.017±0.00 0.441±0.20 0.060±0.03 0.247±0.12 0.214±0.03 0.055±0.03 0.338±0.19 0.028±0.02 0.258±0.13 1.994±0.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093H CIL_00093H_0002 VISTA 1:163597221-164199818

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002092 IEA positive regulation of receptor internalization
GO:0002687 IGI positive regulation of leukocyte migration
GO:0004888 IEA transmembrane signaling receptor activity
GO:0005615 IEA extracellular space
GO:0005901 IEA caveola
GO:0005905 IEA coated pit
GO:0007157 IEA heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007159 IEA leukocyte cell-cell adhesion
GO:0007202 IEA activation of phospholipase C activity
GO:0016021 IEA integral component of membrane
GO:0030029 IEA actin filament-based process
GO:0030863 IEA cortical cytoskeleton
GO:0033691 IEA sialic acid binding
GO:0043274 IEA phospholipase binding
GO:0045121 IEA membrane raft
GO:0048471 IEA perinuclear region of cytoplasm
GO:0050901 IEA leukocyte tethering or rolling
GO:0070492 IEA oligosaccharide binding
GO:0070555 IEA response to interleukin-1

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009123 sele selectin E protein_coding Danio_rerio
ENSDARG00000042138 selp selectin P protein_coding Danio_rerio
ENSG00000007908 SELE selectin E protein_coding Homo_sapiens

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