C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: lysophosphatidylglycerol acyltransferase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026623 Lpgat1 10090 + 1:191717834-191784255 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000110855 Lpgat1-001 191717834-191784255 protein_coding
  ENSMUST00000110856 Lpgat1-002 191718389-191779977 protein_coding
  ENSMUST00000130876 Lpgat1-005 191718521-191760184 protein_coding
  ENSMUST00000133076 Lpgat1-003 191717834-191719398 protein_coding
  ENSMUST00000138494 Lpgat1-004 191718027-191719786 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110855ENSMUST00000110856ENSMUST00000133076
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110855 6.402±2.26 5.274±0.39 8.937±4.50 9.367±3.12 10.541±0.37 2.611±0.64 1.873±0.10 2.809±1.90 4.066±3.35 2.345±0.35 1.886±0.23 4.876±2.01 14.696±0.61 2.997±0.98
ENSMUST00000110856 22.631±3.76 5.470±1.52 N/A N/A 9.909±1.55 1.662±0.19 N/A 3.393±0.01 N/A 3.517±0.40 N/A 5.081±1.29 N/A 6.396±0.56
ENSMUST00000133076 N/A 2.233±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.216±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041V CIL_00041V_0002 CGP 1:191717834-191833050

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0008654 IEA phospholipid biosynthetic process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016746 IEA transferase activity, transferring acyl groups

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013542 lpgat1 lysophosphatidylglycerol acyltransferase 1 protein_coding Danio_rerio
ENSG00000123684 LPGAT1 lysophosphatidylglycerol acyltransferase 1 protein_coding Homo_sapiens

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