C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysophosphatidylglycerol acyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110856 Lpgat1-002 ENSMUSG00000026623 10090 + 1:191718389-191779977 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLungOvaryTestisENSMUST00000110856
Transcript ID Adipose Adrenal Breast Colon Kidney Lung Ovary Testis
ENSMUST00000110856 22.631±3.76 5.470±1.52 9.909±1.55 1.662±0.19 3.393±0.01 3.517±0.40 5.081±1.29 6.396±0.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041V CIL_00041V_0002 CGP 1:191717834-191833050

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0008654 IEA phospholipid biosynthetic process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016746 IEA transferase activity, transferring acyl groups

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000366996 LPGAT1-002 protein_coding Homo_sapiens 0 1528
ENST00000366997 LPGAT1-001 protein_coding Homo_sapiens 0 1718
ENST00000520373 RP11-293D9.2-001 processed_pseudogene Homo_sapiens 0 845

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