C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysophosphatidylglycerol acyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110855 Lpgat1-001 ENSMUSG00000026623 10090 + 1:191717834-191784255 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110855
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110855 6.402±2.26 5.274±0.39 8.937±4.50 9.367±3.12 10.541±0.37 2.611±0.64 1.873±0.10 2.809±1.90 4.066±3.35 2.345±0.35 1.886±0.23 4.876±2.01 14.696±0.61 2.997±0.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041V CIL_00041V_0002 CGP 1:191717834-191833050

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005783 IEA endoplasmic reticulum
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0008654 IEA phospholipid biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0016746 IEA transferase activity, transferring acyl groups

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000366996 LPGAT1-002 protein_coding Homo_sapiens 0 1524
ENST00000366997 LPGAT1-001 protein_coding Homo_sapiens 0 1768
ENST00000520373 RP11-293D9.2-001 processed_pseudogene Homo_sapiens 0 845

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