C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: plexin A2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026640 Plxna2 10090 + 1:194619829-194816869 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027952 Plxna2-001 194619829-194816869 protein_coding
  ENSMUST00000124785 Plxna2-003 194804710-194814227 retained_intron
  ENSMUST00000125381 Plxna2-002 194644856-194660012 processed_transcript
  ENSMUST00000135664 Plxna2-004 194764567-194786628 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027952ENSMUST00000125381
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027952 6.529±3.05 1.574±0.26 3.900±0.58 19.446±10.31 3.425±0.81 4.824±1.71 4.269±0.97 2.684±0.38 2.802±1.66 6.444±1.24 1.470±0.12 5.176±1.60 3.000±2.83 1.839±1.09
ENSMUST00000125381 N/A N/A N/A N/A 2.262±0.00 4.166±0.14 N/A 1.236±0.36 0.479±0.00 N/A N/A 2.411±0.54 0.699±0.19 3.228±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001756 IEP somitogenesis
GO:0005622 IEA intracellular
GO:0005886 TAS plasma membrane
GO:0005887 IDA integral component of plasma membrane
GO:0007166 IDA cell surface receptor signaling pathway
GO:0017154 IGI semaphorin receptor activity
GO:0021915 IEP neural tube development
GO:0021935 IMP cerebellar granule cell precursor tangential migration
GO:0030334 IMP regulation of cell migration
GO:0051642 IMP centrosome localization
GO:0060037 IEP pharyngeal system development
GO:0060174 IEP limb bud formation
GO:0071526 IMP semaphorin-plexin signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060372 PLXNA2 plexin A2 protein_coding Danio_rerio
ENSDARG00000061275 plxna1 plexin A1 protein_coding Danio_rerio
ENSDARG00000088702 plexin A2 protein_coding Danio_rerio
ENSG00000076356 PLXNA2 plexin A2 protein_coding Homo_sapiens

Loading