C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: plexin A2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027952 Plxna2-001 ENSMUSG00000026640 10090 + 1:194619829-194816869 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027952
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027952 6.529±3.05 1.574±0.26 3.900±0.58 19.446±10.31 3.425±0.81 4.824±1.71 4.269±0.97 2.684±0.38 2.802±1.66 6.444±1.24 1.470±0.12 5.176±1.60 3.000±2.83 1.839±1.09

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001756 IEP somitogenesis
GO:0005622 IEA intracellular
GO:0005886 TAS plasma membrane
GO:0005887 IDA integral component of plasma membrane
GO:0007166 IDA cell surface receptor signaling pathway
GO:0017154 IGI semaphorin receptor activity
GO:0021915 IEP neural tube development
GO:0021935 IMP cerebellar granule cell precursor tangential migration
GO:0030334 IMP regulation of cell migration
GO:0051642 IMP centrosome localization
GO:0060037 IEP pharyngeal system development
GO:0060174 IEP limb bud formation
GO:0071526 IMP semaphorin-plexin signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367033 PLXNA2-001 protein_coding Homo_sapiens 0 7169
ENST00000460870 PLXNA2-006 processed_transcript Homo_sapiens 0 599
ENST00000463510 PLXNA2-004 processed_transcript Homo_sapiens 0 363
ENST00000480053 PLXNA2-003 processed_transcript Homo_sapiens 2e-20 102
ENST00000483048 PLXNA2-002 processed_transcript Homo_sapiens 0 789

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