C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102988 Dclre1c-003 ENSMUSG00000026648 10090 + 2:3424150-3454092 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102988
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102988 2.129±0.21 0.819±0.14 2.002±1.01 2.929±0.79 2.396±0.60 1.406±0.52 0.658±0.05 0.718±0.04 1.172±1.25 1.590±0.08 0.341±0.14 1.554±0.42 2.308±0.77 2.747±0.90

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000014 IEA single-stranded DNA endodeoxyribonuclease activity
GO:0000723 IMP telomere maintenance
GO:0000737 IEA DNA catabolic process, endonucleolytic
GO:0005634 IC nucleus
GO:0006302 IMP double-strand break repair
GO:0006310 IMP DNA recombination
GO:0008409 ISO 5'-3' exonuclease activity
GO:0010212 IMP response to ionizing radiation
GO:0030183 IMP B cell differentiation
GO:0033151 IMP V(D)J recombination
GO:0051276 IMP chromosome organization
GO:0090305 IEA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357717 DCLRE1C-002 protein_coding Homo_sapiens 0 320
ENST00000378241 DCLRE1C-013 protein_coding Homo_sapiens 0 401
ENST00000378242 DCLRE1C-010 protein_coding Homo_sapiens 0 320
ENST00000378246 DCLRE1C-001 protein_coding Homo_sapiens 0 320
ENST00000378249 DCLRE1C-003 protein_coding Homo_sapiens 0 320
ENST00000378254 DCLRE1C-006 protein_coding Homo_sapiens 0 1234
ENST00000378255 DCLRE1C-005 protein_coding Homo_sapiens 0 1157
ENST00000378258 DCLRE1C-007 protein_coding Homo_sapiens 0 1236
ENST00000378278 DCLRE1C-009 protein_coding Homo_sapiens 0 1417
ENST00000378289 DCLRE1C-008 protein_coding Homo_sapiens 0 1147
ENST00000396817 DCLRE1C-004 protein_coding Homo_sapiens 0 1157
ENST00000418843 DCLRE1C-011 protein_coding Homo_sapiens 0 222
ENST00000492201 DCLRE1C-014 processed_transcript Homo_sapiens 0 202

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