C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tenascin N
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026725 Tnn 10090 - 1:160085036-160153580 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000039178 Tnn-001 160085036-160153580 protein_coding
  ENSMUST00000131919 Tnn-002 160085968-160147888 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000039178ENSMUST00000131919
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000039178 0.020±0.01 0.024±0.00 0.081±0.03 0.055±0.05 0.100±0.03 0.050±0.01 0.029±0.01 0.840±0.31 0.017±0.02 0.017±0.01 0.040±0.01 0.017±0.01 0.020±0.01
ENSMUST00000131919 N/A N/A N/A 0.064±0.05 0.064±0.03 0.048±0.02 N/A N/A N/A N/A 0.072±0.04 0.013±0.01 0.015±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EK CIL_0002EK_0002 CGP 1:160085036-160202170

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005178 IDA integrin binding
GO:0005578 IDA proteinaceous extracellular matrix
GO:0007160 IDA cell-matrix adhesion
GO:0007409 IDA axonogenesis
GO:0009986 IDA cell surface
GO:0016049 IDA cell growth
GO:0016477 IDA cell migration
GO:0042802 IDA identical protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000024829 tnw tenascin W protein_coding Danio_rerio
ENSG00000120332 TNN tenascin N protein_coding Homo_sapiens

Loading