C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tenascin N
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000131919 Tnn-002 ENSMUSG00000026725 10090 - 1:160085968-160147888 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonOvaryPlacentaTestisENSMUST00000131919
Transcript ID Brain Breast Colon Ovary Placenta Testis
ENSMUST00000131919 0.064±0.05 0.064±0.03 0.048±0.02 0.072±0.04 0.013±0.01 0.015±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EK CIL_0002EK_0002 CGP 1:160085036-160202170

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005178 IDA integrin binding
GO:0005578 IDA proteinaceous extracellular matrix
GO:0007160 IDA cell-matrix adhesion
GO:0007409 IDA axonogenesis
GO:0009986 IDA cell surface
GO:0042802 IDA identical protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000239462 TNN-001 protein_coding Homo_sapiens 0 3518
ENST00000621086 TNN-201 protein_coding Homo_sapiens 0 2095
ENST00000622870 TNN-202 protein_coding Homo_sapiens 0 2115

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