C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026786 Apbb1ip 10090 + 2:22774094-22875653 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000014290 Apbb1ip-001 22774094-22875653 protein_coding
  ENSMUST00000131195 Apbb1ip-002 22774094-22836145 processed_transcript
  ENSMUST00000132993 Apbb1ip-004 22774445-22828586 retained_intron
  ENSMUST00000148315 Apbb1ip-003 22774390-22856086 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000014290ENSMUST00000131195ENSMUST00000132993ENSMUST00000148315
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000014290 2.876±0.46 0.329±0.11 2.146±0.44 0.586±0.50 3.604±1.40 0.827±0.23 0.560±0.22 0.405±0.23 3.190±3.71 1.801±0.22 0.443±0.31 0.830±0.86 2.890±2.15 1.112±0.31
ENSMUST00000131195 2.606±1.23 0.209±0.10 N/A N/A 3.745±1.23 0.487±0.07 0.382±0.03 0.271±0.11 0.190±0.04 1.603±0.53 N/A 0.501±0.20 N/A 0.580±0.17
ENSMUST00000132993 N/A 0.349±0.00 N/A N/A N/A N/A N/A 0.070±0.01 0.078±0.00 N/A N/A N/A N/A N/A
ENSMUST00000148315 N/A 0.234±0.00 N/A N/A N/A N/A N/A 0.095±0.04 0.063±0.00 N/A 0.022±0.00 0.135±0.01 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R5 CIL_0000R5_0002 CGP 2:22622205-22875653
CIL_0000R4 CIL_0000R4_0002 CGP 2:22774094-22940266

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005886 IEA plasma membrane
GO:0007165 IEA signal transduction
GO:0030054 IEA cell junction
GO:0042995 IEA cell projection

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016505 apbb1ip amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein protein_coding Danio_rerio
ENSG00000077420 APBB1IP amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein protein_coding Homo_sapiens

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