C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000R5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000136750-ENSG00000077420 CGP 9606 10:26216307-26567803
GeneTranscriptPositionBiotype
ENSG00000077420 (APBB1IP)
amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein 		ENST00000356785 (APBB1IP-001) 26438425-26501938 protein_coding
ENST00000376236 (APBB1IP-003) 26438203-26567803 protein_coding
ENST00000493857 (APBB1IP-002) 26561943-26567226 processed_transcript
ENSG00000136750 (GAD2)
glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa) 		ENST00000259271 (GAD2-002) 26216665-26304558 protein_coding
ENST00000376248 (GAD2-004) 26218193-26224760 protein_coding
ENST00000376261 (GAD2-001) 26216307-26304558 protein_coding
ENST00000428517 (GAD2-003) 26216733-26219320 protein_coding
CIL_0000R5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026787-ENSMUSG00000026786 CGP 10090 2:22622205-22875653
GeneTranscriptPositionBiotype
ENSMUSG00000026786 (Apbb1ip)
amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein 		ENSMUST00000014290 (Apbb1ip-001) 22774094-22875653 protein_coding
ENSMUST00000131195 (Apbb1ip-002) 22774094-22836145 processed_transcript
ENSMUST00000132993 (Apbb1ip-004) 22774445-22828586 retained_intron
ENSMUST00000148315 (Apbb1ip-003) 22774390-22856086 processed_transcript
ENSMUSG00000026787 (Gad2)
glutamic acid decarboxylase 2 		ENSMUST00000028123 (Gad2-001) 22622205-22693874 protein_coding
ENSMUST00000156728 (Gad2-002) 22623304-22630001 processed_transcript
ENSMUSG00000083057 (Gm13356)
predicted gene 13356 		ENSMUST00000121678 (Gm13356-001) 22762744-22763078 processed_pseudogene
ENSMUSG00000083453 (Gm13338)
predicted gene 13338 		ENSMUST00000120235 (Gm13338-001) 22713511-22713871 processed_pseudogene
ENSMUSG00000085353 (1700092C17Rik)
RIKEN cDNA 1700092C17 gene 		ENSMUST00000135792 (1700092C17Rik-001) 22755984-22762273 lincRNA
ENSMUST00000169209 (1700092C17Rik-201) 22761972-22762241 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000R5_0001ENSG00000077420ENST00000356785ENST00000376236ENST00000493857ENSG00000136750ENST00000259271ENST00000376248ENST00000376261ENST00000428517CIL_0000R5_0002ENSMUSG00000026786ENSMUST00000014290ENSMUST00000131195ENSMUST00000132993ENSMUST00000148315ENSMUSG00000026787ENSMUST00000028123ENSMUST00000156728ENSMUSG00000083057ENSMUST00000121678ENSMUSG00000083453ENSMUST00000120235ENSMUSG00000085353ENSMUST00000135792ENSMUST00000169209
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000R5_0001ENSG00000077420ENST00000356785ENST00000376236ENSG00000136750ENST00000259271ENST00000376261CIL_0000R5_0002ENSMUSG00000026786ENSMUST00000014290ENSMUST00000131195ENSMUST00000132993ENSMUST00000148315ENSMUSG00000026787ENSMUST00000028123ENSMUST00000156728ENSMUSG00000083057ENSMUST00000121678ENSMUSG00000083453ENSMUST00000120235ENSMUSG00000085353ENSMUST00000135792
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000077420 ENST00000356785 N/A N/A 0.601±0.00 N/A N/A 0.615±0.00 0.087±0.00 N/A N/A 0.846±0.00 0.050±0.00 N/A N/A N/A
ENST00000376236 11.311±0.00 13.474±0.00 0.299±0.00 2.515±1.37 17.428±15.58 2.237±0.84 0.855±0.68 3.198±0.07 9.205±8.71 4.477±1.35 0.375±0.22 2.316±1.08 6.161±0.47 1.205±0.95
ENST00000493857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000136750 ENST00000259271 N/A N/A N/A 3.629±0.00 0.004±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.193±0.10
ENST00000376248 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000376261 0.008±0.00 N/A N/A 5.712±0.01 0.013±0.00 N/A N/A N/A 0.008±0.00 N/A N/A N/A 0.013±0.00 0.155±0.07
ENST00000428517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026786 ENSMUST00000014290 2.876±0.46 0.329±0.11 2.146±0.44 0.586±0.50 3.604±1.40 0.827±0.23 0.560±0.22 0.405±0.23 3.190±3.71 1.801±0.22 0.443±0.31 0.830±0.86 2.890±2.15 1.112±0.31
ENSMUST00000131195 2.606±1.23 0.209±0.10 N/A N/A 3.745±1.23 0.487±0.07 0.382±0.03 0.271±0.11 0.190±0.04 1.603±0.53 N/A 0.501±0.20 N/A 0.580±0.17
ENSMUST00000132993 N/A 0.349±0.00 N/A N/A N/A N/A N/A 0.070±0.01 0.078±0.00 N/A N/A N/A N/A N/A
ENSMUST00000148315 N/A 0.234±0.00 N/A N/A N/A N/A N/A 0.095±0.04 0.063±0.00 N/A 0.022±0.00 0.135±0.01 N/A N/A
ENSMUSG00000026787 ENSMUST00000028123 0.014±0.01 0.018±0.00 0.005±0.00 14.505±2.28 0.011±0.00 0.081±0.04 0.016±0.00 0.013±0.01 0.015±0.01 0.016±0.01 N/A 0.069±0.04 0.009±0.00 0.163±0.08
ENSMUST00000156728 N/A N/A N/A N/A N/A 0.271±0.15 N/A N/A 0.008±0.00 N/A N/A 0.033±0.00 N/A 0.488±0.15
ENSMUSG00000083057 ENSMUST00000121678 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.210±0.00 N/A 0.437±0.14
ENSMUSG00000083453 ENSMUST00000120235 N/A N/A N/A 0.475±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085353 ENSMUST00000135792 N/A N/A N/A N/A N/A N/A N/A 0.106±0.00 N/A N/A N/A N/A N/A 72.932±36.74
ENSMUST00000169209 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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