C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: laminin gamma 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026840 Lamc3 10090 + 2:31887291-31946539 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028187 Lamc3-001 31887344-31946539 protein_coding
  ENSMUST00000135995 Lamc3-003 31925057-31925695 processed_transcript
  ENSMUST00000138325 Lamc3-002 31887291-31945246 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028187ENSMUST00000138325
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028187 4.041±3.05 7.043±1.48 1.146±0.00 1.661±1.26 4.465±2.14 0.407±0.14 0.142±0.06 3.328±1.65 0.065±0.09 2.745±1.16 0.230±0.08 8.829±5.19 0.443±0.51 2.091±1.32
ENSMUST00000138325 1.061±0.62 2.707±0.82 N/A 0.895±0.00 1.099±0.00 0.748±0.49 N/A N/A 0.042±0.04 N/A 0.175±0.00 3.099±0.47 0.058±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XQ CIL_0008XQ_0002 VISTA 2:31340644-31941311
CIL_0006II CIL_0006II_0002 CGP 2:31813290-31946539
CIL_00088E CIL_00088E_0002 VISTA 2:31827730-32428586
CIL_0002EI CIL_0002EI_0003 CGP 2:31887291-31973442

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000904 IGI cell morphogenesis involved in differentiation
GO:0005576 TAS extracellular region
GO:0005604 IDA basement membrane
GO:0007155 IEA cell adhesion
GO:0007601 IGI visual perception
GO:0014002 IGI astrocyte development
GO:0060041 IGI retina development in camera-type eye

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000093572 lamc3 laminin, gamma 3 protein_coding Danio_rerio
ENSG00000050555 LAMC3 laminin, gamma 3 protein_coding Homo_sapiens

Loading