C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: gelsolin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026879 Gsn 10090 + 2:35279663-35307892 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028239 Gsn-001 35282380-35307892 protein_coding
  ENSMUST00000124323 Gsn-002 35282513-35285025 processed_transcript
  ENSMUST00000139867 Gsn-003 35282651-35284828 processed_transcript
  ENSMUST00000142324 Gsn-004 35279663-35293567 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028239ENSMUST00000142324
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028239 2389.493±1408.05 383.552±65.88 2003.245±139.02 4.888±3.20 1765.356±595.47 350.770±45.48 627.249±25.55 114.805±19.38 39.982±32.07 1564.305±200.75 216.522±30.32 513.407±93.87 200.544±126.29 26.318±13.71
ENSMUST00000142324 N/A N/A N/A 8.812±0.00 431.362±0.00 N/A N/A N/A N/A N/A N/A 125.334±0.00 112.550±0.81 4.954±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004FH CIL_0004FH_0002 CGP 2:35180205-35307892
CIL_0006N3 CIL_0006N3_0002 CGP 2:35279663-35336976

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001726 IEA ruffle
GO:0005515 IPI protein binding
GO:0005576 ISS extracellular region
GO:0005615 IEA extracellular space
GO:0005829 ISS cytosol
GO:0005925 IEA focal adhesion
GO:0006915 IEA apoptotic process
GO:0007568 IEA aging
GO:0008154 IEA actin polymerization or depolymerization
GO:0014003 IEA oligodendrocyte development
GO:0015629 IEA actin cytoskeleton
GO:0016192 IMP vesicle-mediated transport
GO:0030027 IDA lamellipodium
GO:0030041 ISS actin filament polymerization
GO:0030155 IEA regulation of cell adhesion
GO:0042060 IEA wound healing
GO:0042246 IEA tissue regeneration
GO:0043234 IEA protein complex
GO:0045471 IEA response to ethanol
GO:0046872 IEA metal ion binding
GO:0048015 IEA phosphatidylinositol-mediated signaling
GO:0048471 IEA perinuclear region of cytoplasm
GO:0051014 ISS actin filament severing
GO:0051593 IEA response to folic acid
GO:0051693 IEA actin filament capping
GO:0060271 ISS cilium morphogenesis
GO:0070062 IEA extracellular vesicular exosome
GO:0071276 IEA cellular response to cadmium ion
GO:0072562 IEA blood microparticle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011459 gsna gelsolin a protein_coding Danio_rerio
ENSDARG00000045262 gsnb gelsolin b protein_coding Danio_rerio
ENSG00000148180 GSN gelsolin protein_coding Homo_sapiens

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