C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004FH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000119396-ENSG00000148180 CGP 9606 9:121178137-121332843
GeneTranscriptPositionBiotype
ENSG00000119396 (RAB14)
RAB14, member RAS oncogene family 		ENST00000373840 (RAB14-001) 121178137-121201869 protein_coding
ENST00000451303 (RAB14-002) 121181499-121223014 protein_coding
ENSG00000148180 (GSN)
gelsolin 		ENST00000341272 (GSN-201) 121268102-121332842 protein_coding
ENST00000373805 (GSN-012) 121326732-121329315 processed_transcript
ENST00000373806 (GSN-010) 121326582-121332662 protein_coding
ENST00000373807 (GSN-005) 121311471-121331890 protein_coding
ENST00000373808 (GSN-202) 121268102-121332842 protein_coding
ENST00000373818 (GSN-001) 121299793-121332842 protein_coding
ENST00000373823 (GSN-013) 121207800-121332843 protein_coding
ENST00000394353 (GSN-203) 121286081-121332842 protein_coding
ENST00000412819 (GSN-204) 121268102-121332842 protein_coding
ENST00000432226 (GSN-002) 121268060-121317112 protein_coding
ENST00000434663 (GSN-014) 121207794-121265186 processed_transcript
ENST00000436847 (GSN-205) 121268102-121332842 protein_coding
ENST00000449733 (GSN-206) 121268102-121332842 protein_coding
ENST00000449773 (GSN-003) 121268060-121312477 protein_coding
ENST00000475428 (GSN-004) 121281511-121312489 processed_transcript
ENST00000477104 (GSN-006) 121286123-121312495 processed_transcript
ENST00000477553 (GSN-008) 121328853-121332589 processed_transcript
ENST00000477863 (GSN-007) 121268163-121312475 processed_transcript
ENST00000483960 (GSN-009) 121281472-121321311 processed_transcript
ENST00000485767 (GSN-011) 121308371-121317886 processed_transcript
ENST00000545652 (GSN-207) 121286580-121332842 protein_coding
ENSG00000214651 (RP11-477J21.2)
 ENST00000455437 (RP11-477J21.2-001) 121238117-121240089 processed_pseudogene
ENSG00000243738 (RN7SL181P)
RNA, 7SL, cytoplasmic 181, pseudogene 		ENST00000462921 (RN7SL181P-201) 121203159-121203435 misc_RNA

Homo sapiens Ensembl (GRCh38)

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CIL_0004FH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026878-ENSMUSG00000026879 CGP 10090 2:35180205-35307892
GeneTranscriptPositionBiotype
ENSMUSG00000026878 (Rab14)
RAB14, member RAS oncogene family 		ENSMUST00000028238 (Rab14-001) 35180205-35201120 protein_coding
ENSMUST00000113025 (Rab14-002) 35180205-35201120 protein_coding
ENSMUST00000126224 (Rab14-004) 35199874-35200978 processed_transcript
ENSMUST00000137709 (Rab14-007) 35182129-35184050 processed_transcript
ENSMUST00000142015 (Rab14-006) 35183190-35184148 processed_transcript
ENSMUST00000148543 (Rab14-003) 35189900-35200789 processed_transcript
ENSMUST00000155359 (Rab14-008) 35191521-35192843 processed_transcript
ENSMUST00000155483 (Rab14-005) 35186285-35192663 processed_transcript
ENSMUSG00000026879 (Gsn)
gelsolin 		ENSMUST00000028239 (Gsn-001) 35282380-35307892 protein_coding
ENSMUST00000124323 (Gsn-002) 35282513-35285025 processed_transcript
ENSMUST00000139867 (Gsn-003) 35282651-35284828 processed_transcript
ENSMUST00000142324 (Gsn-004) 35279663-35293567 protein_coding
ENSMUSG00000084768 (Gm13605)
predicted gene 13605 		ENSMUST00000124489 (Gm13605-001) 35224535-35226254 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004FH_0001ENSG00000119396ENST00000373840ENST00000451303ENSG00000148180ENST00000341272ENST00000373805ENST00000373806ENST00000373807ENST00000373808ENST00000373818ENST00000373823ENST00000394353ENST00000412819ENST00000432226ENST00000434663ENST00000436847ENST00000449733ENST00000449773ENST00000475428ENST00000477104ENST00000477553ENST00000477863ENST00000483960ENST00000485767ENST00000545652ENSG00000214651ENST00000455437ENSG00000243738ENST00000462921CIL_0004FH_0002ENSMUSG00000026878ENSMUST00000028238ENSMUST00000113025ENSMUST00000126224ENSMUST00000137709ENSMUST00000142015ENSMUST00000148543ENSMUST00000155359ENSMUST00000155483ENSMUSG00000026879ENSMUST00000028239ENSMUST00000124323ENSMUST00000139867ENSMUST00000142324ENSMUSG00000084768ENSMUST00000124489
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004FH_0001ENSG00000119396ENST00000373840ENST00000451303ENSG00000148180ENST00000341272ENST00000373806ENST00000373808ENST00000373818ENST00000394353ENST00000477863ENSG00000214651ENST00000455437ENSG00000243738ENST00000462921CIL_0004FH_0002ENSMUSG00000026878ENSMUST00000028238ENSMUST00000113025ENSMUST00000126224ENSMUST00000137709ENSMUST00000148543ENSMUSG00000026879ENSMUST00000028239ENSMUST00000142324ENSMUSG00000084768ENSMUST00000124489
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119396 ENST00000373840 2.035±0.00 1.415±0.00 1.846±0.00 3.777±0.00 2.121±0.00 3.206±0.00 1.437±0.00 3.277±0.00 3.950±0.00 5.002±0.00 1.843±0.00 7.518±7.05 9.596±9.43 17.471±0.00
ENST00000451303 N/A N/A 2.632±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000148180 ENST00000341272 N/A N/A N/A 10.356±0.00 38.675±0.00 24.597±0.00 18.042±0.00 N/A 31.105±0.00 12.424±0.00 N/A N/A 54.915±4.10 N/A
ENST00000373805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000373806 N/A 206.920±0.00 N/A 91.816±0.00 526.379±0.00 503.218±0.00 N/A 68.862±0.00 9.464±0.00 170.750±0.00 N/A 134.072±0.00 198.742±0.00 188.287±26.14
ENST00000373807 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000373808 N/A N/A 6.630±0.00 10.821±0.00 N/A 11.209±0.00 N/A 2.642±0.00 42.764±0.00 N/A 60.936±0.00 140.476±118.24 25.948±0.00 N/A
ENST00000373818 1278.430±0.00 301.425±0.00 6.922±0.00 97.437±0.00 543.820±488.54 423.315±395.74 210.050±177.92 108.620±0.00 66.837±56.62 172.969±151.86 212.972±0.00 160.533±103.30 59.657±33.95 192.003±139.99
ENST00000373823 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000394353 N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.780±0.00 N/A N/A N/A N/A
ENST00000412819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434663 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436847 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449733 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477553 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477863 N/A N/A N/A N/A N/A N/A N/A 4.152±0.00 N/A N/A N/A N/A N/A N/A
ENST00000483960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000214651 ENST00000455437 N/A N/A N/A N/A 0.040±0.02 0.224±0.00 0.075±0.00 0.178±0.00 0.072±0.00 0.802±0.00 N/A 0.008±0.00 N/A 0.040±0.00
ENSG00000243738 ENST00000462921 0.204±0.00 0.073±0.00 N/A 0.564±0.18 0.077±0.00 0.069±0.00 0.072±0.00 0.154±0.00 0.276±0.00 0.152±0.00 N/A 0.381±0.00 N/A 0.272±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026878 ENSMUST00000028238 28.018±2.46 263.877±61.67 47.533±4.04 43.277±14.43 48.187±28.70 56.086±22.49 23.647±3.74 42.108±8.15 30.113±6.51 68.881±20.49 16.095±5.34 62.629±52.69 32.838±14.10 10.039±3.97
ENSMUST00000113025 2.859±0.62 N/A 5.649±0.00 6.110±1.01 3.140±0.08 N/A N/A N/A 3.005±0.41 4.440±0.00 N/A 4.254±0.37 N/A 1.229±0.15
ENSMUST00000126224 N/A 503.734±147.71 N/A N/A N/A 150.411±65.67 N/A 72.529±0.00 58.828±13.06 N/A N/A 166.856±68.36 N/A N/A
ENSMUST00000137709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 39.803±0.00 35.049±0.00 10.876±0.00
ENSMUST00000142015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148543 N/A N/A N/A 192.769±0.00 N/A N/A N/A N/A N/A N/A N/A 145.913±0.00 141.466±7.87 125.168±0.00
ENSMUST00000155359 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000026879 ENSMUST00000028239 2389.493±1408.05 383.552±65.88 2003.245±139.02 4.888±3.20 1765.356±595.47 350.770±45.48 627.249±25.55 114.805±19.38 39.982±32.07 1564.305±200.75 216.522±30.32 513.407±93.87 200.544±126.29 26.318±13.71
ENSMUST00000124323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139867 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142324 N/A N/A N/A 8.812±0.00 431.362±0.00 N/A N/A N/A N/A N/A N/A 125.334±0.00 112.550±0.81 4.954±0.00
ENSMUSG00000084768 ENSMUST00000124489 N/A N/A 0.056±0.00 0.014±0.00 N/A N/A N/A 0.044±0.00 N/A N/A N/A N/A N/A 35.731±3.26

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