C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATP-binding cassette, sub-family B (MDR/TAP), member 11
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027048 Abcb11 10090 - 2:69238282-69342616 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000102709 Abcb11-002 69238289-69342600 protein_coding
  ENSMUST00000102710 Abcb11-001 69238282-69342614 protein_coding
  ENSMUST00000133663 Abcb11-003 69238310-69239078 processed_transcript
  ENSMUST00000180142 Abcb11-201 69238289-69342616 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000102710ENSMUST00000133663ENSMUST00000180142
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000102710 0.034±0.03 0.063±0.00 0.012±0.00 0.201±0.18 0.037±0.00 0.025±0.01 0.008±0.00 48.052±39.70 0.025±0.01 0.171±0.08 0.332±0.30 0.518±0.13
ENSMUST00000133663 0.139±0.00 N/A 0.018±0.00 0.297±0.00 N/A N/A N/A N/A 0.191±0.00 0.333±0.07 0.115±0.07 0.744±0.00
ENSMUST00000180142 N/A N/A N/A N/A N/A N/A N/A 20.839±6.50 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HC CIL_0008HC_0002 VISTA 2:69119794-69721610
CIL_0006HX CIL_0006HX_0002 CGP 2:69211073-69342616
CIL_0006HZ CIL_0006HZ_0002 CGP 2:69238282-69404533

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0015126 IBA canalicular bile acid transmembrane transporter activity
GO:0015722 IBA canalicular bile acid transport
GO:0016020 IDA membrane
GO:0016021 IBA integral component of membrane
GO:0042626 IBA ATPase activity, coupled to transmembrane movement of substances
GO:0045177 IDA apical part of cell
GO:0046581 IDA intercellular canaliculus
GO:0055085 IBA transmembrane transport
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070078 abcb11b ATP-binding cassette, sub-family B (MDR/TAP), member 11b protein_coding Danio_rerio
ENSG00000073734 ABCB11 ATP-binding cassette, sub-family B (MDR/TAP), member 11 protein_coding Homo_sapiens

Loading